ggKbase home page

SCN18_30_10_14_R2_B_scaffold_3339_6

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(6219..9407)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5329 similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 1054.0
  • Bit_score: 1434
  • Evalue 0.0
Gll0876 protein {ECO:0000313|EMBL:BAC88817.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 1057.0
  • Bit_score: 1290
  • Evalue 0.0
AcrB/AcrD/AcrF family multidrug efflux protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 1057.0
  • Bit_score: 1290
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8 → SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8 → SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8 → SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8 → SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8 → Verrucomicrobia

Sequences

DNA sequence
Length: 3189
GTGTGGATTGTTCGTCTCGCGCTCCGCCGGACGTACACGTTCGTCGTGGTCGCCGTCCTCATCGCCGTGCTCGGGGTGGTCGCCGCGAACCGGATGGCCACGGACGTGTTCCCCGAGGCGGACGTGCCGGTCGTGACCATCGTCTGGCAGTACAGCGGGATGCCGCCCGACGAGGTCGAGAGCCGACTCGTCCTGGTCACCGAGCGGGTGCTCACCACGGCGGTGAACGACATCGAGCACGTCGAGAGCCAGTCGCTCACCGGCGTCGGCGTGATCCGGGTGTACTTCCAGCCCGGGGCGCGGATCGAGGCGGCGGTCGCCCAGGTGACCGCCACCTGCCAGACGCTGCTGAAGGTCATGCCGCCGGGGATCACCCCGCCGTTCATCGTCCGGTACAGCGCGACGAGCGTGCCGGTTGTACAGATCGCGGTCAGCAGCGACACGCTGACCGAGCAGCAGATCTTCGACTACACGGCGAACTTCCTCATCCAGCGGCTCGGGACGGTCCAGGGCGCGCGCATCCCGCAGCCGTACGGCGGGCAGGTCCGGCAGGTGATGGTGGACCTCGACGCCGACCAGCTCTACGCCCGCGGGCTATCCCCCGCCGACGTGAGCGCGGCGATCGCCAACCAGAACCTGATCGTCCCGGCCGGGTCGGCGAAGATCGGGGACACCGAGTACAACGTCCGGCTCAACTCCAGCCCGGACCTGATCGCCGCGTTCAACGACATCCCGGTCCGCACGGTGAACGGCGTGCCGGTGTACGTGCGGAACGTGGCCCAGGTGCGCGACGGGTTCGCGGTGCAGACGAACATCGTCCGCCGCGACGGCCGGCGGGCGGTGCTGCTGAGCGTGCTCAAGGGCGAGGGCGCGTCCACCCTCGATGTGGTGCGCCGGGTGAAGGAGGCGCTGCCGGGCGTGCAGGCCCAGCTCCCGCCCGAGCTGAAGATGGACATCCTCCTCGACCAGTCGGTGTTCGTCCGCGCCGCCGTCGACGGCGTACTGAAGGAGGGGGCGGTCGCCGCCGGGCTGACGGCGCTGATGATCCTCCTGTTCCTCGGCTCGTGGCGGTCCACCCTCATCGTCGCCGTCTCCATCCCGCTCTCGATCATGGCGTCCGTCGTCGTGCTGTGGGCGCTGGGGCAGACGATGAACACGCTCACCCTCGGCGGGATGGCGCTGGCGGTCGGCATCCTGGTGGACGACGCGACAGTCGAGATCGAGAACGTCCACCGCCAGATGGGGATGCGCAAGCCGCTCCGCCGGGCGATCCTCGACGGCGCCGCCCAGATCGCCGTACCGGCGTTCGTCTCCACACTGTCCATCTGCATCGTGTTCCTGCCGGTGTTCTTCCTCACCGGCCCGGCGGCGTACCTGTTCGCGCCGCTCGCGCTCTCGGTCATCTTCGCCATGCTCGCGTCATACTTCCTGTCGCGGACGTTGGTGCCGACGATGGTCCTCTACCTACTGCCGAAGGAGATCCCGCTGTACCAGGGCGGGGCCACCGGTGGCGGGCCGATCTGGTGGGTCCACGAACGGTTCGAGCGGCAGTTCGAGCGGTTCCGCGGCTTCTACCAGGGGCTGCTCGGGTGGGCGCTCGACCACCGCTACACCACCCTCGCGGCGATGCTCGGGTTCGCTCTCGGCTCGTTCGCACTGTTCCCGCACGTCGGCCAGGACTTCTTCCCCGAGGTGGACGCGGGGCAGATCCGGTTCCACGTGCGGGCACCGGCCGGCACCCGGATTGAGGAGACGGAGAAACTGTTCGGCCGCGTCGAGGACGCGATCCGCGAGCTCGTCCCCGCCGACGAACGGACGCTGATCCTCGATAACATGGGGCTGACGTCGTCGTTCACGGCGATGGCGTACACGGACATCGGGACCGTCAGCGAGTGCGACGGCGAGCTGATGGTGTCGCTGGCGCCGGGCCACCGGCCGACGCGCGAGTACGTGTCAGCGCTGCGGGACGAACTCCCGCGGCGGTTCCCCGGCTGCACGTTCTACTTCGAGCCGGCCGACATCACCGGGCAGATCCTCAACGCCGGGCTCCCCGCGCCGATCAACGTGCAGGTCGTCGGCGTGGACCGCGAGGCGAACCTGGCGGCGGCCAAAAAGCTGCGCCGCGCCATCGCCGCGGTCCCGGGCGCGGCCGACGTCCACATCCACCAGATCACCGACGGCCCCGAGTTGCGCGTGGACGTGGACCGGATCATGGCGTCCGAACTCAACCTGACCCAGAACGACGTGACCGGCAGCGTGCTGGTGTCGCTGTCGTCCACGACCCAGGTGGCGCCGAACTTCTGGGTCAGCCCGATCAACCGCGTGAACTACCGCGTGGCGGTGCAGACGCCGCCGTACCGGATCGACTCGGTGGACACGCTGATGAGCACGCCGATCGTAAAGGCCGGCCAGCCGCCGCAACTACTCGCCAACCTGGCGGAGATGCGGCGGTCCACTACCCCACTGAACGTCAGCCACTACGACACGCAGACCGTGTACGAGGTGAACGCGGGCATCCAGGGACGCGATCTAGGGGCGGTGGTCGCCGACGTACAGCGGGCCGTGGACGAGGTGACGCCGACACTCCCGCGCGGGAGTTCGATCGTCGTCCGCGGGCAGGCCCGCAGCATGACCACGTCGTTCACCGGGCTCGCCTACGGCCTCGGGTTCGCCATCCTCTTCGTCTACCTGCTGATGGTGGTGAACTTCCAGTCGTGGACCGACCCGTTCGTCATCCTCACCGCCCTCCCGGGCGCGGCGGCGGGCATCCTGTGGGCGCTGTACGTCACCCGGACCACGCTCAGCGTCCCGGCCCTCATGGGCGCGATCATGTGCGTCGGCGTTGCGACCTCGAACTCGATCCTGCTCGTCACGTTCGCCAACGACCGCCGCAAGGAGGGCGCCGACGCCCTCACCGCGGCGCTGGACGCCGGCGCGACCCGGCTGCGGCCGGTGCTGATGACCGCGACCGCCATGATCGTCGGCATGCTGCCGATGAGCCTCGGGCTCGGCGAGGGCGGCGAGCAGAACGCCCCGCTCGGCCGGGCGGTCGTCGGCGGGTTGCTGGTGGCGACGTGCTTCACCCTGTTCTTCGTCCCGGTCGCGTACAGCCTGCTCCGCCGCAACCCGCCGGCGCCGGAGGTGACCGACGCCGACCTGGACCGCGACGCCCCGACGGGAGGAGGCTGA
PROTEIN sequence
Length: 1063
VWIVRLALRRTYTFVVVAVLIAVLGVVAANRMATDVFPEADVPVVTIVWQYSGMPPDEVESRLVLVTERVLTTAVNDIEHVESQSLTGVGVIRVYFQPGARIEAAVAQVTATCQTLLKVMPPGITPPFIVRYSATSVPVVQIAVSSDTLTEQQIFDYTANFLIQRLGTVQGARIPQPYGGQVRQVMVDLDADQLYARGLSPADVSAAIANQNLIVPAGSAKIGDTEYNVRLNSSPDLIAAFNDIPVRTVNGVPVYVRNVAQVRDGFAVQTNIVRRDGRRAVLLSVLKGEGASTLDVVRRVKEALPGVQAQLPPELKMDILLDQSVFVRAAVDGVLKEGAVAAGLTALMILLFLGSWRSTLIVAVSIPLSIMASVVVLWALGQTMNTLTLGGMALAVGILVDDATVEIENVHRQMGMRKPLRRAILDGAAQIAVPAFVSTLSICIVFLPVFFLTGPAAYLFAPLALSVIFAMLASYFLSRTLVPTMVLYLLPKEIPLYQGGATGGGPIWWVHERFERQFERFRGFYQGLLGWALDHRYTTLAAMLGFALGSFALFPHVGQDFFPEVDAGQIRFHVRAPAGTRIEETEKLFGRVEDAIRELVPADERTLILDNMGLTSSFTAMAYTDIGTVSECDGELMVSLAPGHRPTREYVSALRDELPRRFPGCTFYFEPADITGQILNAGLPAPINVQVVGVDREANLAAAKKLRRAIAAVPGAADVHIHQITDGPELRVDVDRIMASELNLTQNDVTGSVLVSLSSTTQVAPNFWVSPINRVNYRVAVQTPPYRIDSVDTLMSTPIVKAGQPPQLLANLAEMRRSTTPLNVSHYDTQTVYEVNAGIQGRDLGAVVADVQRAVDEVTPTLPRGSSIVVRGQARSMTTSFTGLAYGLGFAILFVYLLMVVNFQSWTDPFVILTALPGAAAGILWALYVTRTTLSVPALMGAIMCVGVATSNSILLVTFANDRRKEGADALTAALDAGATRLRPVLMTATAMIVGMLPMSLGLGEGGEQNAPLGRAVVGGLLVATCFTLFFVPVAYSLLRRNPPAPEVTDADLDRDAPTGGG*