ggKbase home page

SCN18_30_10_14_R2_B_scaffold_3485_5

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(5502..6863)

Top 3 Functional Annotations

Value Algorithm Source
WD40 repeat-containing protein n=1 Tax=Frankia sp. CN3 RepID=G6HDI6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 438.0
  • Bit_score: 147
  • Evalue 1.70e-32
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CDR18162.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.1
  • Coverage: 432.0
  • Bit_score: 151
  • Evalue 1.70e-33
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 31.4
  • Coverage: 437.0
  • Bit_score: 143
  • Evalue 1.20e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 → SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 → SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 → SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 → SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 → Bacteria

Sequences

DNA sequence
Length: 1362
ATGCGCCGCGGATGCCTGCTCGCCCTCCTTGCACTCGCGGCTCTCGCGGCCCGAGCACCCGCCGCCGACCTGCCGCCCGGCGCCGTGCGGCGCCTCGGCGAGGCGCGGTTCCGCGCCGGCGGGGCGGTCGCCGAGCTCGTCTTCTCCGCCGACGGGTCCGAACTCGTCTCGCACGTCCCCGGCCCGGACGGCGACCGGGTGACGGTGTGGGACGCGGCCACCGGTGAACGCCTGCGGACCGGCGTGCCGCCGCGCACTGCCGGGGCGCGCGTCCGCTGGGGCGCCAGCGCCGTCCCCGGCACCGACCTCGGCGTCGTCATCGGCCTGGACGGTACCGCCGTGGTCCGCGACTTCGCCGCGAAGCAGGACCGCGCGAAACTCTCCGGCCACGCCGCCCGCGTGACCGCCGTTGCCGCCTCGCCCGACGGCCGCCGCCTCGCCACCGCCTCCGCCGACGGCCTCATCCGCACCTGGGACGCCCGCACCTTCCGCCCGCTCTCCACGCCGAGCGGCCACCTCGGCCCGGTCCGCTCGGTGGAAGTGTCGCCCGACGGCCGGCTCGCGCTGACGGTCGGCGCCGACCGCAGCGCCCGCGTCTGGGACGTCGCCACCGGCCGCGAGGTCCGCGCCTACCCGCTCGACGAGGGCGGCGCCGCGACGTTCACCCCCGACGGCGCCGCGGTGAAGCTCCGCACCGCCGAGCGCGTGCTGACGCGCGACCTGCTCACCGGGCTCGAAACCGCCCGCTACGACCTGCCGCACGTTGACCTGTTCACCGGGCCACGTCTGCTCACCGGCGCGTGCCTGGCACTGTCGCCGGACGGCCGAGTGTTGGCGCTCGGCCGCGCCGGCGGCGAGGTCGAGCTGATCGAAACGGCGACGCTCGGCGTGCGCCGGCGGCTGACCGGGGCGGGGCCACGCTGCCGCGACGCGGCGTTCACCCCGGACGGCACGCGCCTCCTCACCGCCGGCCCGGGCGACGGTGTGTTGGTGTGGCCGGTCCGCGTCCGCGACGTGCCGCTGACGACCGAGCTGAAGCGCGAGACGAGCGCGGCGAAGCTGTGGGACCGCCTCGCGTCGCCGGACGCTGAAACGGCGTACGCGGCGATGGCGCGGCTGGCCGCCGACCCGGTCGCGGCGGCGAGGATGGCCCGGCTGCGGCTCGGCGCGCCGGCCGACGTGCTGACGGCGACCCGCGGCGTGGAACTGCTGGAGGCGCTGAACACGCCCGACGCCCGCGGGCTGCTCCGCGACCTGGCCGACGGCGGCGCGCGGTCGGCGGCGCGGGCGCTGGCCCGCCTCGGCGACGCGCGCGAACCGCCCGGTGACATCATCCGCACCACCGGCGGCACGGCGCCGTGA
PROTEIN sequence
Length: 454
MRRGCLLALLALAALAARAPAADLPPGAVRRLGEARFRAGGAVAELVFSADGSELVSHVPGPDGDRVTVWDAATGERLRTGVPPRTAGARVRWGASAVPGTDLGVVIGLDGTAVVRDFAAKQDRAKLSGHAARVTAVAASPDGRRLATASADGLIRTWDARTFRPLSTPSGHLGPVRSVEVSPDGRLALTVGADRSARVWDVATGREVRAYPLDEGGAATFTPDGAAVKLRTAERVLTRDLLTGLETARYDLPHVDLFTGPRLLTGACLALSPDGRVLALGRAGGEVELIETATLGVRRRLTGAGPRCRDAAFTPDGTRLLTAGPGDGVLVWPVRVRDVPLTTELKRETSAAKLWDRLASPDAETAYAAMARLAADPVAAARMARLRLGAPADVLTATRGVELLEALNTPDARGLLRDLADGGARSAARALARLGDAREPPGDIIRTTGGTAP*