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SCN18_30_10_14_R2_B_scaffold_3866_8

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(7302..8378)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 363.0
  • Bit_score: 224
  • Evalue 1.60e-55
pseudouridine synthase, RluA family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4D9D similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 355.0
  • Bit_score: 478
  • Evalue 5.70e-132
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 363.0
  • Bit_score: 224
  • Evalue 3.20e-56

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Taxonomy

SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGCCGCCGATCGTGTTCGTGGTGGACCGCCGGGAGAACGGGAAGACGCTCGCGTCGGTCCTGAAGACGCGCTACGCCCTGTCGTGGGCGCAGGCCAAACGGCTGATCGAGAAGCGGCACGTCCGCGTCGGTCAGCAGGTCGAGACCGACGCGGCCCGGCGGCTGAAGGTCGGCAAGCAGGTCCAGCTCGACAGCGGCACCGTCGAGGTGAAGCACGCAACCCCCGTCGCGCCGGCGAAGCCCGCCCCGAAGCCGAAATCACCCGCCCCGAAGCCGCCGCGCGTCAAGCCGCCGTCCGACGACGCCTCCCGTGATCCGCTGCTCCCCGCCGAGGCGGTCGTCTATTCCGACGACGCGGTCGTGGTCGTGAACAAGCCGGCCGGCTTGACGACGATGCGACACAAGGAGGAGGCCGAGGAGTTCGGCCGCGGCAAGCGGTTCCTGCCGAAGACGCTCGCCGACCTGCTCCCGGCCGCGCTCGGGGCACCGGGGCGGCCGGTGATCGCCGTCCACCGCATCGACCGCGACACGTCCGGTCTTGTCGTGTTCGCCCGTACCCGCGCCGCGGCCGAGCACCTGACCGCGCAGTTCCGCAAGCACACCGCCGAGCGCCGTTACCTCGCCCTCACCCGCGGCGTGCCGAAGGCGGGGCGGGTCGAGTCGGTCTTCGTCCCGGACCGCGGTGACGGGCGCCGCGGCACGTCGCGCGACCTCCTCACCGAGGGCGGCAAGAAGGCGGTCACGCACGTCACGGTGTCGGAGCGGCTGGGGAGTTTCGCGGTCGTCGAGTGCCGGCTTGAGACGGGGCGGACGCACCAGGTCCGCATCCACCTCGGCGAGGCGGGGACGCCGCTGTGCGGGGAGCGGGTGTACGACCGGCCGCTGAACGGGAAGCCGCTACCCGACCGGAGCGGTGCGGAGCGGCCGATGCTGCACGCCGCCCGGCTGGGGTTCGTTCACCCCGAGACCGGGCAGGCGGTGGGCTGGGACGTGAAGCCGCCAGACGACTTCGCCGAACTGTGGGCGGAACTCCGGCGGGCGGCCGCGGACGTCACTTCACCAGAACGCAGAAGTTGA
PROTEIN sequence
Length: 359
MPPIVFVVDRRENGKTLASVLKTRYALSWAQAKRLIEKRHVRVGQQVETDAARRLKVGKQVQLDSGTVEVKHATPVAPAKPAPKPKSPAPKPPRVKPPSDDASRDPLLPAEAVVYSDDAVVVVNKPAGLTTMRHKEEAEEFGRGKRFLPKTLADLLPAALGAPGRPVIAVHRIDRDTSGLVVFARTRAAAEHLTAQFRKHTAERRYLALTRGVPKAGRVESVFVPDRGDGRRGTSRDLLTEGGKKAVTHVTVSERLGSFAVVECRLETGRTHQVRIHLGEAGTPLCGERVYDRPLNGKPLPDRSGAERPMLHAARLGFVHPETGQAVGWDVKPPDDFAELWAELRRAAADVTSPERRS*