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SCN18_30_10_14_R2_B_scaffold_4463_3

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 2707..4113

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-H factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4345 similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 191.0
  • Bit_score: 144
  • Evalue 2.50e-31
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 186.0
  • Bit_score: 141
  • Evalue 3.60e-31
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA29004.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 186.0
  • Bit_score: 141
  • Evalue 1.80e-30

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGCCGTTCGCGCGGGTCCGATCGCTGCTCTGGGACGCCCTACCGGGGCGGTGGGTGCGGCGCGGCCGCAACCGAGGCACGCGCCTCCGGTTGCGGCTCGAACCGCTCGAAGATCGCGCGCTGCTGACCACACTGACGGTCACCGTAACGGACACGGCCACCCTCCCTTCCGACATCCGCATTGTCTGGATCCGCGAGCTGGAGTCAGGCCGGTACGACAGCGTGACGATCACCAGCCTCGATCGGGCCGGGCTCGATCGGTTGCTCGACGCCCTCCGCTGGCCTGCCCCCGTCGTCATCGGTCCGCCACCGGTCGTCTCGCCCCCGGTACCTCCGGCCTCCTCGGTCCCGCCCCCGCCGGCTTCGCCCCCACCCGCGACTTCCCCGGGTCAGCCCCCCTCACCCGAACCCGCCGACCCCGCACCGGGGCGAGTGACCCTTGCGCCGGCCGGACCGGCGGGCGGGTGGACCCTCGTCCTGTTCAAGCCCGCTCCTTCTACCAGCCCGGCCGAAGAGGCCCAGCCGGTCCCCACCAGGGATGTGGCTCCGGCAGTCACTCCGACCCGTGGCGGGACCGACCACCCGGCCGCGCCCCCGGAGCGGTCTTTCGTCCCTGAGCCATCTGACCGCCCCCTTGCGCCGCCCCGGCGGGATGCCCAAGGAGGTGTCCCGCCGCCAGAGAACCGCAGCCGCGCCGCCCACCCCCCACCGATCGGCCGGGCGGACGGCCTTCGCCCGACCACCGGAGATCACGACTCCGCCGCCGGCACCGGGCGGAGGGGCTTCCGCCCGCCCCCGCCGGATCCGGGCGGGCGGTCCGCACCCGAACCCGAACCCGGACTCCGACCGGACGCCGGTACGCCGGCCGACGGCACCCTCCTGCGGCGGTTCGCCGCCGGGGATCAGCCGGCGTTCGCCGAACTGGTCCGACGGCACGAGACGTCCGTTCTGTCGGTCTGCACCCGGGTTCTCGGGGATTCGGACCAGGCCCGGGACGCGGCCCAGGCGGCGTTCCTGACCCTCGCCCGCCGGGCCGCCGGGCTGGACGTGAGTCGCCCGCTCGCCGGGTGGCTGTACCGGGTCGCGTACCGCATGGCCCTACGGGTCCGGCGGGCGGCCGCCCGCCGGTGGCGGGCCGAGCAGATCGCCGTGGGCCGGCGCCGGGAGGACGTGGCCGGTCCGGACCACAGTTTGGAGCAGGCAGACCTGTTCCGCGCCCTCCGGGAGGAGTTGGACCGCCTTCCCGACAAGTACCGGGTGCCGCTCACCCTCTGCTACCTCGACGGCCTGACCCACGACGAGGTGGCGCGGGCGGCCGGACTGCCGCGGGGGTCGGTCGCCAAGCGGCTCGGGGAAGGGCTCGACCGGCTGCGGGAGCGGCTGGCCGGGCGCGGGATTCTCCTCTGA
PROTEIN sequence
Length: 469
MPFARVRSLLWDALPGRWVRRGRNRGTRLRLRLEPLEDRALLTTLTVTVTDTATLPSDIRIVWIRELESGRYDSVTITSLDRAGLDRLLDALRWPAPVVIGPPPVVSPPVPPASSVPPPPASPPPATSPGQPPSPEPADPAPGRVTLAPAGPAGGWTLVLFKPAPSTSPAEEAQPVPTRDVAPAVTPTRGGTDHPAAPPERSFVPEPSDRPLAPPRRDAQGGVPPPENRSRAAHPPPIGRADGLRPTTGDHDSAAGTGRRGFRPPPPDPGGRSAPEPEPGLRPDAGTPADGTLLRRFAAGDQPAFAELVRRHETSVLSVCTRVLGDSDQARDAAQAAFLTLARRAAGLDVSRPLAGWLYRVAYRMALRVRRAAARRWRAEQIAVGRRREDVAGPDHSLEQADLFRALREELDRLPDKYRVPLTLCYLDGLTHDEVARAAGLPRGSVAKRLGEGLDRLRERLAGRGILL*