ggKbase home page

SCN18_30_10_14_R2_B_scaffold_4124_4

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 5143..6072

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002DEEF1D similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 305.0
  • Bit_score: 381
  • Evalue 6.30e-103
SMP-30/gluconolaconase/LRE domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 302.0
  • Bit_score: 358
  • Evalue 1.20e-96
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:ADB18959.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 302.0
  • Bit_score: 358
  • Evalue 6.10e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11 → SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 930
GTGCCACGCCTCTCGATCACCCGCCTGGTCGCCACCTGCCTGCTACTTTCGGCCGGGACCGCCCTCGCGCAAGACGCGCCGGTCCCCGGCGTCGGGCCGACCGGCCCGGTCAAGAAGATGGACGGCAAGTACGCCTTCACCGAAGGCCCGGCCGCCGACGCCGACGGGAACGTGTACTTCAGCGACATCCCGAACAAGACGATCCACAAGATCGACCCGGCCGGGAAGGTGTCGGTGTTCCGCGAGAACTCGAACTCGGCGAACGGGCTCATGGTCAACGCCAAGGGCGAGGTCGTGGCGTGCGAGATGGAAGGGGCCGTCGTCGCCCTGTCGGCCGACGGCAAGGCCCGCCGGGTGGTCGCCGGGGAGCACGACGGGAAGCGGTTCAACGCTCCGAACGACTTGGTGCTGGACCGCGCCGGCGGCGTGTACTTCACCGACCCGATGTTCCGCGCCCCGATGCCGCTCCCGCAGGGGAAGACGTGCGTCTACTACGCCGACGCCGCCGGCAAGGTAACGCGGCTGATCGACGACCTGCCGAACCCGAACGGGGTGCTCCTGTCGCCGGACGAGAAAACCCTGTACGTCCTCCCGAGCGGGCAGAAGCAGATGATGGCGTACCCGGTCGAGGCGCCCGGGAAGCTCGGCAAGGGGCGGGTGTTCTGCGAGCTGGAGCAGGCGAAGGCGGGCGGCAGCGGCGGCGGGGACGGCGGGACGGTGGACTCGAAGGGGAATGTTTACGTCACGTCCGCGACCGGGCTGCAGGTGTTCGATCCCGCTGGCAAGCGGCTGGGGACGATCCGGTTCCCGGAGCAGCCGGCGAACGCGACGTTCGGCGGGAAGGACTTGAAGACGCTGTACGTCACCGCGCGCACGTCGGCGTACACCTGCCCGATGGAGGTCGCCGGGCACCGCTACCCGGCGAAGTGA
PROTEIN sequence
Length: 310
VPRLSITRLVATCLLLSAGTALAQDAPVPGVGPTGPVKKMDGKYAFTEGPAADADGNVYFSDIPNKTIHKIDPAGKVSVFRENSNSANGLMVNAKGEVVACEMEGAVVALSADGKARRVVAGEHDGKRFNAPNDLVLDRAGGVYFTDPMFRAPMPLPQGKTCVYYADAAGKVTRLIDDLPNPNGVLLSPDEKTLYVLPSGQKQMMAYPVEAPGKLGKGRVFCELEQAKAGGSGGGDGGTVDSKGNVYVTSATGLQVFDPAGKRLGTIRFPEQPANATFGGKDLKTLYVTARTSAYTCPMEVAGHRYPAK*