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SCN18_30_10_14_R2_B_scaffold_3759_8

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 10067..10627

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-70 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C63 similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 175.0
  • Bit_score: 128
  • Evalue 5.70e-27
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 171.0
  • Bit_score: 112
  • Evalue 9.20e-23
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA30566.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 171.0
  • Bit_score: 112
  • Evalue 4.60e-22

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGACTTCTGAACTCTCCGACCCCGCGGTCGCCCTCGAACGGTACCGCGATCACCTCTTGGCCACCGCCCGGCGCCAGACCGACCCACGATTGGCGGTCGCGGTGGACCTGTCGGGAGTAGTGCAGCAGACCCTGTTGGAGGCGCACGCTTCGGCCGGCGAGTGGGCCGGGTGGCCGACCGCCCGGCGGGAGGCCTGGCTCCGCCGGGTGCTGGCCAACAACCTCGCCGACGAGGTCCGGCGGCAGACCGCGGCCGTCCGGGACGTCGGCCGGCGGGTGGCTCTCGAGACCGAATCGTCCGGGGTGGCGTCCCGCGGGGCCGCCGAGTTGACCGCCGCCGGCTCCTCCCCGAGCCAGCGCGCGGGGCGGAACGAGGACGAGCGCCGGCTCGCCGCCGCCGTCGCCGGGCTCCCCGCCGACCAGCGGCAGGCGGTCGAACTCCACCACCTCCAGGGGCTGACCCTCGCGGCCACGGCGGCCGCGATGGGGCTGACGACGCAGTCGGTCGTCGGCCTCCTGTTCCGGGGGCTGCGGGGCCTCCGGGCCGTTCTCGCCGAGTGA
PROTEIN sequence
Length: 187
MTSELSDPAVALERYRDHLLATARRQTDPRLAVAVDLSGVVQQTLLEAHASAGEWAGWPTARREAWLRRVLANNLADEVRRQTAAVRDVGRRVALETESSGVASRGAAELTAAGSSPSQRAGRNEDERRLAAAVAGLPADQRQAVELHHLQGLTLAATAAAMGLTTQSVVGLLFRGLRGLRAVLAE*