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SCN18_30_10_14_R2_B_scaffold_5399_4

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(2105..2647)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037E31F0 similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 176.0
  • Bit_score: 153
  • Evalue 1.60e-34
Variovorax paradoxus strain MEDvA23 contig_49, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28203.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 169.0
  • Bit_score: 182
  • Evalue 3.50e-43

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGCCCGCAGTGCCGGAAAGCGAGCGAGTCGCCATCCTCCGTGAGTGGGGCGTCTCCGAACCGCTCATCCGGCTCTCTTGCGGCGAGGTGCTACACGAGCAGTTCAACGACTGCTGTTTGGGGCCGCCATGGTACGTGTACCACGGGTCGCTTCAGACCCCCGAGGTCGCCCCGCTCGCCGTGCTCTGGGAGTGGTGCGACAAGGTTACTGGCGTCTGGCACCGCAGCGGTCGGTTGGAGTTCATCGAGTACGGGTTCGGCGGGGCGGAGGAGTTCGAGGTGGTGGCCCGCACCGAGCAAGGGTTCTGGGCCGACCAGTTCGACTTCCTGTACGAGTGCGATGGCCCGCTCGAGGAGTTGCGGGCCGCTGCGGCTGCGGTCGGGTTCCGGTTCTTGGAGCGGCACCTGTCGGCCCGTGAGGCCGCCGGGGCTGTGCTGGGCACGTACGAGGGGCATCAGGCGTGGTTGCGTGCTCTTATCGCCACCATTGATGCCGAGACCCAAGACGCCGAACCGGTCGCTGCACCTGACCCGGCCACCTGA
PROTEIN sequence
Length: 181
MPAVPESERVAILREWGVSEPLIRLSCGEVLHEQFNDCCLGPPWYVYHGSLQTPEVAPLAVLWEWCDKVTGVWHRSGRLEFIEYGFGGAEEFEVVARTEQGFWADQFDFLYECDGPLEELRAAAAAVGFRFLERHLSAREAAGAVLGTYEGHQAWLRALIATIDAETQDAEPVAAPDPAT*