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SCN18_30_10_14_R2_B_scaffold_5471_5

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(3575..5248)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3DF5 similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 352.0
  • Bit_score: 240
  • Evalue 2.40e-60
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49278.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 589.0
  • Bit_score: 181
  • Evalue 2.40e-42
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 347.0
  • Bit_score: 173
  • Evalue 1.00e-40

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1674
ATGCCCTGCCGGACGCTCGAACGCCTGTCCGCCTCGCTCGCCCCGGCCGACGGCCCGGACGACGCCGAGTTGCTCGCGCGGTTCACCCACGACCGCGACGAGGGCGCGTTCGCGCACCTCGTCCGGCGCCACGCCCGGCTGGTCCTCCGCGTCTGCCGCGGGGTGCTGCGGGACCGGCACGCCGCCGAGGATTGTGCCCAGGCGACGTTCCTGGCGCTCGCCCGGCAGACCCCGTCCATCACCCGGGGGACGGTCGCCGGGTGGCTCTTCCGGGTCGCCCGCCGCACCGCCGTCCGGGCCGCCCGACGGCGCCAGCCGACGACCGGGCTTGACTCCGAGGCGGCCGACCTCGCGGCCCCGCCGGGCGTGGAAGCTCTGCCCCGAGAGACCGAGGCCGTCCTCCACGAGGAACTGGCCCGACTCCCGGAACACTACCGCGTCCCGGTCCTGCTGTGCTTCTTCGACGGGCTGTCCCACGCCGCCGCCGCCCGCCACCTCGGGTGCCCGGTCGGGACGGTCAACACGCGCATCGCCCGCGCGAAGCGGCTGCTGGCCCGCCGGCTCGCGGGTCGTGGGGTGAGGGGCGAAGCCCTGGGGGTGGTGGCGGTCCCCGCGGCGTTCGTCGGTTCGACCGCCGGGGCGGCGGTCGCCCTCGCGGCCGGGCGCGTGCCGGGTGTGCCGGTCGAGGTCGTGGAGTTGGCGAACTACGGGGGAGGACACATGGTCCGGGACAAACTCGCGCGCGTGGCCTGGGTTCTGGCGGCGGGCGGTGGCCTGGTACTCGGGGCGGCGGTGGCACCCGCGCAGCGGCCCGGCGCCGCGCCGCCCTCGCCCGCCACCGCGCCGGCCCCCGCCCCGCGGCCGACACCGGCCCAGGTGCGCGACGGGGCGGTCAAGGCCATCGCCGCCAACTACGCCCGGCTCAAGACGGTCACCGCCACGGTCGAACAGGTCGCCCTCGACCCGTCCGTCACGGAGGAGCGGACGACGGTCCAGCGCACCCCGGGCGGCGGGGAGGCGACTTGGATTCAACGGCCGCGGTTCGTCCGGACCCTGTCGCTGACCCTGCGGGGCGAGGAGATGCGTTGCAGCGCCGCCCCGGACGGGGAGGTGTGGGCGTTCGGCGGGGGCGTCTGGACCCGGTACAGCCCGGAGCTGAAGACGCTGTCCAAGCTCCGGCCCGACCAGACCCCGGGGATGTTCCCCTTCGACCCCCGGGAGGCCGGCAGCACCGAGTTCCGGGAGCGGTTCCTCGACCGGCTCCGGGCGGACGAGTTGGTCCGGGCCGAGACGCTCGACACCCCGGCCGGGCGGCGGGTGGTGGTCGTGACGAAGGCGGCGGGGGTGGAGCCGGTCCGGCATGAGTTCGACCCGGCGCGGAACCACCTGCCGACCCGGGTGGAGTACCCGCACCCGGACGGCGGGGTGAACGTCGTTGTGGACGTAACCTACCGGGAGGCGGTGAAGGGGGAAGCGTGGTTCCCCGCGGAGGTGACGAACACGATGTACGGGAAGGCCGGGGCGAAGGCGGGCGACCCGGGGTGGACGGGGCGGCTGTCGCTGACGGTGAAGGAGCTGCGGGTGAACGCCCCGCTCCCGGCCGACGCGTTCCACGTCGCCGCCCCTCCCGGCACGTTCGTGAGCGACCTGACGACCGTCCCGCGCACCAAGTAG
PROTEIN sequence
Length: 558
MPCRTLERLSASLAPADGPDDAELLARFTHDRDEGAFAHLVRRHARLVLRVCRGVLRDRHAAEDCAQATFLALARQTPSITRGTVAGWLFRVARRTAVRAARRRQPTTGLDSEAADLAAPPGVEALPRETEAVLHEELARLPEHYRVPVLLCFFDGLSHAAAARHLGCPVGTVNTRIARAKRLLARRLAGRGVRGEALGVVAVPAAFVGSTAGAAVALAAGRVPGVPVEVVELANYGGGHMVRDKLARVAWVLAAGGGLVLGAAVAPAQRPGAAPPSPATAPAPAPRPTPAQVRDGAVKAIAANYARLKTVTATVEQVALDPSVTEERTTVQRTPGGGEATWIQRPRFVRTLSLTLRGEEMRCSAAPDGEVWAFGGGVWTRYSPELKTLSKLRPDQTPGMFPFDPREAGSTEFRERFLDRLRADELVRAETLDTPAGRRVVVVTKAAGVEPVRHEFDPARNHLPTRVEYPHPDGGVNVVVDVTYREAVKGEAWFPAEVTNTMYGKAGAKAGDPGWTGRLSLTVKELRVNAPLPADAFHVAAPPGTFVSDLTTVPRTK*