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SCN18_30_10_14_R2_B_scaffold_5162_5

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(6038..6604)

Top 3 Functional Annotations

Value Algorithm Source
Probable ECF sigma factor n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DRG1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 193.0
  • Bit_score: 128
  • Evalue 4.40e-27
Probable ECF sigma factor {ECO:0000313|EMBL:EDM25771.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.8
  • Coverage: 193.0
  • Bit_score: 128
  • Evalue 6.20e-27
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 186.0
  • Bit_score: 109
  • Evalue 1.00e-21

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGTCACACACCACCCGCGAGAGCCTGCTCGTCCGGATTCGCGGCGGGGACGAGGTGGCCTGGGAAGAGTTCCACACCCGCTACCGGTCGCTCATCGCTTGGGCGGCCGGTCGGGCCGGGCTGGCCGGGGCCGACCTCGACGACGCCGTCCAGGACGTGATGCTCGAGCTGTTCCGCGGCCAGCCGACGTTCCGGTATGACCGCACCCGGGGCCGGTTCCGGGACTACCTGTTCGTGGTCACCCGCCGGGCCGCCGCCCGGGCGCGGGCGCGGGCCGCCCGGCAGGGGGTGACCGCGGTCGAATTCCCGGAGCCAGCGGCCGACGACGGACTCCAGGCGGAGTGGGAGGCGGAGTGGCAGCGGACGGTGCTTCGGGAAGCACTTGACGTGGTCCGCGGGGAGGTCGAGGCACGGACGTTCCGGGCGTTCGAGCTCTACGAACTGGAGGGGCGGGACGTGGCGGCGGTGGCGACCGAGTTGGGGGTGTCGGCGGCGACCGTGTACCAGGCCCGGACCCGGATTGTCCGGCGGTTGCGAGCGGTCGCCGACGGGCTGGCCGAGCGATGA
PROTEIN sequence
Length: 189
VSHTTRESLLVRIRGGDEVAWEEFHTRYRSLIAWAAGRAGLAGADLDDAVQDVMLELFRGQPTFRYDRTRGRFRDYLFVVTRRAAARARARAARQGVTAVEFPEPAADDGLQAEWEAEWQRTVLREALDVVRGEVEARTFRAFELYELEGRDVAAVATELGVSAATVYQARTRIVRRLRAVADGLAER*