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SCN18_30_10_14_R2_B_scaffold_5600_3

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 4309..4533

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate-selective porin OprB n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQZ0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 74.0
  • Bit_score: 79
  • Evalue 1.60e-12
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:EEF57767.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 74.0
  • Bit_score: 79
  • Evalue 2.20e-12
carbohydrate-selective porin OprB similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 74.0
  • Bit_score: 66
  • Evalue 3.00e-09

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 225
GTGGACCCGGCCGAGGAGACGCGGCACTGGGGCGTGTTCAGCCAGTTCGGCGTCTCCCACGGGAACCCGAACCCGGTGCGGTTCGTCGCCAACGGCGGGGTCGGCGGGCGGAGCATGGTCCCGGGGCGGGCCTACGACACGTTCGGCGTCAGCTACTTCTACCTCGGGCTCAGCGACAACTTCAAGGCACTGGTCCGCCCGTTCCTCCCGCAGTGGGACGAGTAA
PROTEIN sequence
Length: 75
VDPAEETRHWGVFSQFGVSHGNPNPVRFVANGGVGGRSMVPGRAYDTFGVSYFYLGLSDNFKALVRPFLPQWDE*