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SCN18_30_10_14_R2_B_scaffold_10412_3

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(624..1184)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q314E5_DESDG similarity UNIREF
DB: UNIREF100
  • Identity: 32.1
  • Coverage: 184.0
  • Bit_score: 82
  • Evalue 4.70e-13
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 184.0
  • Bit_score: 82
  • Evalue 1.30e-13
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ABB37701.1}; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.1
  • Coverage: 184.0
  • Bit_score: 82
  • Evalue 6.60e-13

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 561
GTGCCGACCGACCGGCAACCCGACCTCGACCCGGCCGAGGCCGAACTGATCCGCATCAAGGCCCGCGTACTGGCCCGGCGGGGCGTGATCCCCCGCGGCGACACCGCCGACGCCGAGCAGGACCTGGCGCTGGCGCTGTTGGCCGCCCGGGCCGGTTTCGACCCGGCCCGCGGGGGCACCGCCGCGTTCGCCCGGACCGTCGTCCGCCGGGCGGCGGCCAAGATCGCCCGCGGCCGGTTCGCCCCGCGCCGCCACCCCGGCCGCGTGGCCCCGCTGGCGGGGCCGCCGGCCGAACCGGCCACCCTCCCGGGCAGACCGGCGGCGCAGAGGGCCGACCTGGCGATCGACCTCGACGCCGCACTCGCCGCCCTGCCGGCCGGGTTGCGGGCCTACGCCGAGGCGCTGAAGGTGTGGAGCCCGGCCGAGGTCGCCCGGCGGACCGGCGTGTCGCGGCAGACGGTGTACCGCCGCCTGCGGGAACTCGCCGCCGCCCTCGGCGACGCCGGGCTGGGGGACTACCACCCCGGCGCGCCTGACACTTTTCGGGCGCGCGGGCAATAG
PROTEIN sequence
Length: 187
VPTDRQPDLDPAEAELIRIKARVLARRGVIPRGDTADAEQDLALALLAARAGFDPARGGTAAFARTVVRRAAAKIARGRFAPRRHPGRVAPLAGPPAEPATLPGRPAAQRADLAIDLDAALAALPAGLRAYAEALKVWSPAEVARRTGVSRQTVYRRLRELAAALGDAGLGDYHPGAPDTFRARGQ*