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SCN18_30_10_14_R2_B_scaffold_7913_1

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(2..415)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5TVI5_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 125.0
  • Bit_score: 114
  • Evalue 6.40e-23
RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica {ECO:0000313|EMBL:EMI53069.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 125.0
  • Bit_score: 114
  • Evalue 8.90e-23
RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 134.0
  • Bit_score: 106
  • Evalue 4.90e-21

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGAGCACAAACCGCACGGAGTCGTTGGTCCTGTTGCTGACCCAGCACCAGGGGGAGCTGTATCGCTACATCTTCGCCCTCGTCCCCCGTGAGGATGACGCCCGGGACGTCCTCCAGGACGTGAACGTGGCCTTGTTCCGGAAGGCCGACCAGTACGACCCGGACAAACCGTTCCTCCCGTGGGCGTACCAGTTCGCGTACCTCGAGGTGCTGAAGTACCGGGAGCGCTCCCGCCAGGGGCGGGCGGCGTTCAGCCCGGAGATGATCGCCCGGATCGCCCACGACCGCGCGGCGTACGAGCCGATCCTGGCGGCCCGGCTGGCGGCCCTGGACGGGTGTCTGGGGCGGCTGCCGCCGGCCGACCGCGCGCTGATCCACCGCCGCTACCAGCGGAACGCCCGCCCGGACGACCTC
PROTEIN sequence
Length: 138
MSTNRTESLVLLLTQHQGELYRYIFALVPREDDARDVLQDVNVALFRKADQYDPDKPFLPWAYQFAYLEVLKYRERSRQGRAAFSPEMIARIAHDRAAYEPILAARLAALDGCLGRLPPADRALIHRRYQRNARPDDL