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SCN18_30_10_14_R2_B_scaffold_10302_4

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 2496..3773

Top 3 Functional Annotations

Value Algorithm Source
efflux transporter, RND family, MFP subunit n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C388E similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 442.0
  • Bit_score: 492
  • Evalue 3.50e-136
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 450.0
  • Bit_score: 207
  • Evalue 4.80e-51
Secretion protein HlyD family protein {ECO:0000313|EMBL:ADB17626.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.1
  • Coverage: 450.0
  • Bit_score: 207
  • Evalue 2.40e-50

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Taxonomy

SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16 → SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16 → SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16 → SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16 → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1278
ATGACGTCGAGTATACCGACCGCGAACGGGGAACTCGTCAGCCGGGTCCAGCAGCTCCGCCTCGACGGCCAACTCGGCACCGACACCGGCCGGCGCGGCGGCGGCGGGTCGTGGCTGCCGTGGCTCCTGTGCGGCCTCCTGGCCGTCAGTTGGGTCGGCGTCGGCGTTCGGTACTACCGCCAGCCGAGCGCTACGCGGACGGCCGAGCCGGCCGACGGCGCGAAGCCGCCCGGCACGCCGGCCCCACCGACCGGCGGGACGCCGGCCGCCCCGGCCGCGGCGCCGGGGGAGATCGTGCTCCAGCTCAAGGGGAACCTGATCCCGTTCCTCCAGATCGCGGTCAGCCCGCGCGACGTGGCCGGCGAGCTCACAGCCATCACGTTCTGGGAGGGAAAACTGGTCAAGCGCGGCGACACGCTCGCCACCCTGCTCGACTCGCAGTACGCCAACCGGTTCAACACCGAGAAGGCGTCGGTGCTGTCGGCCGAGGCGCAGGTGGCGAAGGCCGAGGCGGGCGAGGTGGCGGCGACGGTGCGGGTGGCGAAGTCGAAGTCGTCGCTGGCCGCGGCGGTGGCCCGGGTGACGAAGGCGGCGGCGGTGCAGGACCGGGCGACGAAGGACTTCGAGCAGGCCCGCCAGCAGCGCGCCGGGAACGCCATCTCGGCGCAGGAGTACCAGAAGTTCGAGGCCGACAAGCTGAGCGCCGACGCCGACACGGTGGTGGCGCGGGCGGACGTGGAGACGGCGACGCGGGAGGTCGAGGCGGTCGAGGCGGAGATGCGAACGAGCAAAGCGAACGTCCGGGCGGCGCGGGCCGAGGCCACCGCCGCCGAGGCCCGCCGCGACGAGGCCAAGCGGCTCCTCGACAACTGCGTCATCATTGCCCCGATCGACGGCACGGTGCTGACGAAGAAGGCCGACCGCGGCAGTCTGGTGAGCCCGGCGGCGTTCAACGTGTCGGCCAGCCTGTGCGAGATCGCCGACCTGCGGATGCTGGAGGTGGAGGTGGACGTGCCCGAGCGGCAGATCACGCGGATCCGCCCGGGGATGGAGTGCCAGGTGGCGGCCGACGCCGACCCGAACCGGGTCTACCGGGGGGTCGTTCACCGGGTCATGCCGATCGCCGACGACAGCAAGAACGTCATCAAAGTGCGCATCCGGGTGTTCCTGCCTCGCAACGAGGAGGCCGGGTCGTTCCTCAAGCCGAAGATGAGCGTGGTGGCGACGGTGGTGAACCGGCAGTTCAGCCCGAACGGCGCCGACCAGACGTGGGATTGA
PROTEIN sequence
Length: 426
MTSSIPTANGELVSRVQQLRLDGQLGTDTGRRGGGGSWLPWLLCGLLAVSWVGVGVRYYRQPSATRTAEPADGAKPPGTPAPPTGGTPAAPAAAPGEIVLQLKGNLIPFLQIAVSPRDVAGELTAITFWEGKLVKRGDTLATLLDSQYANRFNTEKASVLSAEAQVAKAEAGEVAATVRVAKSKSSLAAAVARVTKAAAVQDRATKDFEQARQQRAGNAISAQEYQKFEADKLSADADTVVARADVETATREVEAVEAEMRTSKANVRAARAEATAAEARRDEAKRLLDNCVIIAPIDGTVLTKKADRGSLVSPAAFNVSASLCEIADLRMLEVEVDVPERQITRIRPGMECQVAADADPNRVYRGVVHRVMPIADDSKNVIKVRIRVFLPRNEEAGSFLKPKMSVVATVVNRQFSPNGADQTWD*