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SCN18_30_10_14_R2_B_scaffold_11785_3

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 2529..3074

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DM51_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 180.0
  • Bit_score: 221
  • Evalue 3.70e-55
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 180.0
  • Bit_score: 221
  • Evalue 1.10e-55
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA29913.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 180.0
  • Bit_score: 221
  • Evalue 5.20e-55

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Taxonomy

SCNpilot_BF_INOC_Dechloromonas_67_13 → SCNpilot_BF_INOC_Dechloromonas_67_13 → SCNpilot_BF_INOC_Dechloromonas_67_13 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGACGGACGACGCGGACCGGCTCTACGAGCGCGTCCTGGTGCTCCGCTGCCAGGCCGGCGACGGGGCGGCGTTCGCCGAGCTCGTCGGCCGGTACCAGCCGCGGCTGCGGTACTTCCTCCGCAAGCTCCTCCGCGCCGCGCCGGCGGCCGACGACGCCCTCCAGGACGTGTGGCTCGCCGTGTTCCGCGCCGCCCCGCGGCTCGCCGACGCCGGCGCGTTCCGCGCCTGGGTCTACCGCATCGCCCGCGACCGGGCGCTGCGCGAGCTCCGCGGCCGCCGCCCGCCCGAGCCGCTCGCCGACCTCGACCCGGCCGACGACCGCGACCCGGACCCGTTCACCCCCGACGACGCCCGGCGCGTCCACGCCGCGCTCGACGAACTCGCGCCGGAGCACCGCGAGGTGCTGGTGCTGCGGTACGTCGAGGGGATGAACTACGAGGAGATCGCGCCGGTGGTCGGCAGCCCGGTGGGCACCGTGCGGTCCCGGATTCACTACGCCAAGCGCGCCCTGCGCGCGGTCCTCGAGAAGGACGGCCCGCGATGA
PROTEIN sequence
Length: 182
MTDDADRLYERVLVLRCQAGDGAAFAELVGRYQPRLRYFLRKLLRAAPAADDALQDVWLAVFRAAPRLADAGAFRAWVYRIARDRALRELRGRRPPEPLADLDPADDRDPDPFTPDDARRVHAALDELAPEHREVLVLRYVEGMNYEEIAPVVGSPVGTVRSRIHYAKRALRAVLEKDGPR*