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SCN18_30_10_14_R2_B_scaffold_14065_2

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 145..1578

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FE9 similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 292.0
  • Bit_score: 243
  • Evalue 3.10e-61
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 370.0
  • Bit_score: 167
  • Evalue 4.70e-39
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA28748.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.4
  • Coverage: 370.0
  • Bit_score: 167
  • Evalue 2.40e-38

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Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1434
ATGCGTGCGGTTCCAGGAGGCGCTGGCGACGGCGACTCCGGCGGCACGGTGAATTTTTTTGAGATTTTCGTGAACGCGCGGCCGGTCGGCAGGCAAGTATGGGGCATGAGCCCCATTGCCGGCCCGCTCGCCCGGCTGCTCCCCGCCGCGGCCGACCCCCGCCCCGACGGCGACCTCCTCGCCGCGTTCCTCGACCGCCAGGACGAGGCCGCGTTCGCCGAGCTCGTCCGCCGCCACGGTCCCGTCGTCCGTCTCGCCTGCCGGCGGATGCTCCCCAACCCGGCCGATGCCGACGACGCCTTCCAGGCCACGTTCCTCGTCCTCGCCCGCCGCGGCGCCGGTCTCGACCCGGCCCAGCCGCTCGGGCCGTGGCTGTATCGAGTCGCCGTCCTCACCGCCCGGACCGTCCGCCGCGGCAACGCCCGCCGGTTCGCCCGCCTCGAACAGCCGCCCGCCGCCCTCGCCGCCCCGAGCGCCGAGACCGTCACCGACTTCCGCCTCGACCTGGACGCGGCGCTGCTGGCGCTGCCGGAGAAGTACCGGGCGCCGCTGGTGCTGTGTCACCTCCAGGGGTGGAGCCGGCGGGACGCGGCCGAGCAGCTCGGGTGCCGCGAGGGGACGCTGTCGTCGTTGCTCGCCCGCGGGCTGGTGAAGCTCAAGAACCGCCTCCACGGCTACGACCCGGCCGCCGCCCTCGGCGCCGGCACCGCCCCCGTGCCGCTGGCGCTCGCCGCCGCCACCGCCCGCGCTGCCGTCGCGGGTGTGGGCCGGTCGCCGGCCGCGGTCGCGCTCGCCGACGGCGTCCTGCGCGGGCTCCGGGTGAAGCGACTGGCCGTGGTCGCCGGTGTGGTGTTCGTGCTGGTCGGCGTCGGGTACGGTGTCACAGCCGCCACCCGGCCAGCAGTGCCGGCCGTGGCCCAGACGGTCCCGGGTCCGGCGCTCACGCGCGAGCTGCCGCCGCGGCCGACCCAACCGCCCGAGCCGACGCCCCCGGTCGCGGTGAACAAGCGGATCGACGTGTGCGTCGGCGGGCCGTTCGGCGTCATCCCGCTGCGGGCGACCGAAGTCGGCCCGGCCGGGCCGCTCGGCGAGTCGGTCCCTTTCACCCGGTTCGACCGATTCCAGGAATACCTCGCCACCGCCCGCACCGCTGGCCCGGTGCCGCCGAGCGTCCGCGTGGACGTGTGGGACGAGGCCTTCGTGGATCACACCCGGAAGGTGTTCGCGGCCTGCCGCGCGGCCGGGTACACGTCGGTGCGGGTCCGTGGGCGGGTGCCGACCATCAACCCCGGCGGGTGGCGGGAGTTTGACGACACCCCTGTGGACCTCGCCGACCTCACCCCGCCCCCGCAGGCCAACAGCGGCGGGGGCGGCCGGGCCGGCGGCTGCACGTTCAAGCCGCTCCCTTGTCGTTCCCCGGAAGTGGATTTATAA
PROTEIN sequence
Length: 478
MRAVPGGAGDGDSGGTVNFFEIFVNARPVGRQVWGMSPIAGPLARLLPAAADPRPDGDLLAAFLDRQDEAAFAELVRRHGPVVRLACRRMLPNPADADDAFQATFLVLARRGAGLDPAQPLGPWLYRVAVLTARTVRRGNARRFARLEQPPAALAAPSAETVTDFRLDLDAALLALPEKYRAPLVLCHLQGWSRRDAAEQLGCREGTLSSLLARGLVKLKNRLHGYDPAAALGAGTAPVPLALAAATARAAVAGVGRSPAAVALADGVLRGLRVKRLAVVAGVVFVLVGVGYGVTAATRPAVPAVAQTVPGPALTRELPPRPTQPPEPTPPVAVNKRIDVCVGGPFGVIPLRATEVGPAGPLGESVPFTRFDRFQEYLATARTAGPVPPSVRVDVWDEAFVDHTRKVFAACRAAGYTSVRVRGRVPTINPGGWREFDDTPVDLADLTPPPQANSGGGGRAGGCTFKPLPCRSPEVDL*