ggKbase home page

SCN18_30_10_14_R2_B_scaffold_17697_1

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(2..613)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3564 similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 180.0
  • Bit_score: 173
  • Evalue 1.30e-40
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 183.0
  • Bit_score: 163
  • Evalue 5.00e-38
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA29050.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 183.0
  • Bit_score: 163
  • Evalue 2.50e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 612
ATGTCCGCCCCGCGCCTCCCCGCCGCCGTTCGGGATCTGCTCCGCACCGCACCCGACGCGGCGCCGGACGCGGACCTTCTCACACGCTTCGTCACCGCCCGCGACGAGGTCGCGTTCGCCGGGCTGGTGCGCCGCCACGGGGCGGCGGTGTGGGACGTGTGCCGGTCGGTCCTCGGCAACCGCACCGACGCGGACGACGCCTTCCAGGCGGTATTCCTCACGCTCGCCCGCCAGGCGGCCTCGCTGCGGAAGCCCGCGTCGGTGGGGGCGTGGCTCCACGGGGTTGCGGTGCGCGTGTCGCGGAAGGCCCGCACAGCGGCGGCGCGGCGGCAACTGCGTGAGGCGGACGCCCCGCGGCGGCTCGCGGTCGAGGAGTCCGACCCGAGCTGGGTCGATGTGCGGGCGGCAGTTCACGACGCGCTCGCCGCGCTGCCCGGGGTGTACCGTGAGCCGCTCGTCGCGTGCTACCTCCGCGGCCTCACGCAGGACGACGCCGCGGCCGAACTCGGGCTCACGAAGGCCGCCGTGAAGAAGCGCCTGGAGCGCGGCCGCGACCGGCTCCGGTCGGCGCTCGTCCGCCGTGGTCTCGCCCCCGCGGCCGTTCTCGCCGCC
PROTEIN sequence
Length: 204
MSAPRLPAAVRDLLRTAPDAAPDADLLTRFVTARDEVAFAGLVRRHGAAVWDVCRSVLGNRTDADDAFQAVFLTLARQAASLRKPASVGAWLHGVAVRVSRKARTAAARRQLREADAPRRLAVEESDPSWVDVRAAVHDALAALPGVYREPLVACYLRGLTQDDAAAELGLTKAAVKKRLERGRDRLRSALVRRGLAPAAVLAA