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SCN18_30_10_14_R2_B_scaffold_31578_3

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 1725..2240

Top 3 Functional Annotations

Value Algorithm Source
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 161.0
  • Bit_score: 150
  • Evalue 1.40e-33
chemotaxis protein methyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4567 similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 172.0
  • Bit_score: 235
  • Evalue 2.30e-59
chemoreceptor glutamine deamidase CheD similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 161.0
  • Bit_score: 150
  • Evalue 2.80e-34

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Taxonomy

Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGAAGGCGACGCGCGGGCCGGCGGTGCTCAAGACCCTCCTCGGGTCGTGCGTGTCGGCGTGCGTGTACGACCCCGAGACGGGCGCCGGCGGGATGAACCACTTCTCGCTCCCCGGGGTGTCCGACGCCGGCACGTGCGCCCGGTACGGCGCGCACGCGATGGAACTGCTGGTGACGGCGGTGATGAAGCAGGGCGGGGACCGGTCGCGGCTGCGGGCGAAGGTGTTCGGCGGGGCGAAGGTGCTGGACCTGTCGTCCGAGCGGCTGAACGTCGGGTCGAAGAACGCGGCGTTCGTAATCCAATACCTCTCCGACGAGGGGATCCCGGTCACCGGCCAGTGCCTCGGCGGCACCAGCGGGCTGCTCGTCCGGTTCGACCCGCACACCGGCCGGGCCCGGGTCAAGCCGCTCGCCGGCCGCGAGCTCACCGGCGTGGTCAAGTCGGAGGAGACGTTCGGGCGCGACCTGCTCGACCGCGTGGCCGCCCCGCCGGACGACCGAATCACCATGTTCTGA
PROTEIN sequence
Length: 172
VKATRGPAVLKTLLGSCVSACVYDPETGAGGMNHFSLPGVSDAGTCARYGAHAMELLVTAVMKQGGDRSRLRAKVFGGAKVLDLSSERLNVGSKNAAFVIQYLSDEGIPVTGQCLGGTSGLLVRFDPHTGRARVKPLAGRELTGVVKSEETFGRDLLDRVAAPPDDRITMF*