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SCN18_30_10_14_R2_B_scaffold_709_12

Organism: CN18_30_10_14_R2_B_Alphaproteobacteria_67_12

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: comp(12516..13655)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 340.0
  • Bit_score: 630
  • Evalue 1.00e-177
DNA-directed RNA polymerase alpha chain (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 338.0
  • Bit_score: 621
  • Evalue 1.20e-175
DNA-directed RNA polymerase subunit alpha n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RPOA_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 338.0
  • Bit_score: 621
  • Evalue 4.40e-175

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGGATGCCGCCCGCGCAAGCGCCGGCGCGTCTGAACAGAAAGGAGAGGGTTTACTCCCGGAAGAAGGGGCGGCCAGACCGCGCCCGTCCGGGACGATCCCCATTGGCATGAGACACAGCGCGGTCATTCAACGGAACTGGGAATCGCTCATCAAGCCGGAGAAGCTGGAGGTCGAGCCCGGCGCCGACCCGTCGCGCACGGCCACCATTGTGGCCGAGCCGCTGGAGCGGGGCTTCGGCATGACGCTGGGTAATGCGATCCGGCGCATCCTGCTGTCCTCGTTGCAGGGGGCGGCGGTGACGTCGGTGCAGATCGACGGAGTGCTGCATGAGTTCAGCAGCATCCCCGGCGTGCGCGAGGACGTCACCGACATCGTGCTGAACATTAAGCAGCTCGCGCTCCGGATGCACGGCGAGGGCCCGAAGCGGATGGCGCTGACGGCGACCGGCCCCGGCGAGGTGCGCGCGAGCCAGATCCAGGCCGGCCACGACATCGACATCATGAATCCCGACCTCGTGCTCTGCACGCTGGACGACGGCGTGCGGCTCGGGATGGAGTTCACGGTCAATCTCGGCAAGGGCTATGTGCCGTCGAGTGCCAACCGGCCCGAGGACGCGCCGATCGGGCTGATTCCGGTGGACGCGATCTACTCGCCGGTGCGCCGCGTCTCCTACAAGGTCGAGCCGACCCGCGTCGGGCAGGTGACGGACTACGACAAGCTGCTGTTGACCGTCGAGACCAATGGCGCGGTGACGCCCGAGGATTCGGTGGCGCTGGCGGCGCGCATCTTGCAGGACCAGCTGCAGCTCTTCATCAATTTCGAGGAGCCGCAGCAGATCCGACCCGAGGAGGTGCAGGACGATCTGCCGTTCAACCGCAATCTGCTGCGCAAGGTGGACGAACTAGAATTGTCGGTGCGCAGCGCCAACTGCCTGAAGAACGACAACATCGTCTATATCGGCGACCTGGTGCAGAAATCCGAGCAGGAGATGCTGCGCACGCCGAATTTCGGGCGGAAATCCTTGAACGAGATCAAGGAAGTGCTGACCAACATGGGCCTGACGCTCGGCATGACAGTGCCGGGCTGGCCGCCTGAGAACATCGAAGACCTCGCGAAGCGGCTGGAAGAGCCGTTCTGA
PROTEIN sequence
Length: 380
MDAARASAGASEQKGEGLLPEEGAARPRPSGTIPIGMRHSAVIQRNWESLIKPEKLEVEPGADPSRTATIVAEPLERGFGMTLGNAIRRILLSSLQGAAVTSVQIDGVLHEFSSIPGVREDVTDIVLNIKQLALRMHGEGPKRMALTATGPGEVRASQIQAGHDIDIMNPDLVLCTLDDGVRLGMEFTVNLGKGYVPSSANRPEDAPIGLIPVDAIYSPVRRVSYKVEPTRVGQVTDYDKLLLTVETNGAVTPEDSVALAARILQDQLQLFINFEEPQQIRPEEVQDDLPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKSEQEMLRTPNFGRKSLNEIKEVLTNMGLTLGMTVPGWPPENIEDLAKRLEEPF*