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SCN18_30_10_14_R2_B_scaffold_930_11

Organism: CN18_30_10_14_R2_B_Alphaproteobacteria_67_12

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: comp(11618..12457)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 276.0
  • Bit_score: 404
  • Evalue 6.70e-110
Shikimate dehydrogenase n=2 Tax=Acidiphilium RepID=AROE_ACICJ similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 276.0
  • Bit_score: 402
  • Evalue 2.40e-109
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 276.0
  • Bit_score: 402
  • Evalue 6.70e-110

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGCCCATCCTCACCGGAAAAGCCAGGCTCGCCGGGATTCTCGGCTGGCCGGTGTCGCACTCCCGCTCGCCGCGGCTGCACGGCTTCTGGCTGGAACGGCACGGGATCGATGGCACCTATGTGCCGTTGCCAGTCCCGCCGGACGATTTCGCCGCCGCGGTGCGCAGCCTGGCAGCACTCGGATTCGCGGGCGCCAATGTCACCATCCCGCACAAGCTCGCCGCCTTCGCGGTATGCGACGCGGTGGATGAGTCGGCGCGGCGGGCGGGCGCCGTCAACACATTGGTGTTCCGCGATGGCCGCGTCGAAGGCAGCAACACCGACGGCTCGGGGTTCATCGCCAACCTGCGGGCGCACGGGGTCGATCCCGCCGTCGGCCCCGCGCTCGTTCTCGGCGGCGGCGGCTCGGCCCGCGCGGTAGCGGCCGCGTTGCAGGACGCGGGCGCCCGCGTCAGCCTCGCCAACCGAACCCGAGCACGGGCCGACGCCCTTGCCAACGACCTGCCCGGACTCAAGGTGCTCGATTGGAACGCGCGGCACGTCGCCCTCGCCGACCACGCGCTGGTCGTCAACACCACATCCCTCGGCATGACGGGCAACCCGGCATTGGAGCTCGATCTCGACCGCGCCCCGGCCGGGATGGCCGTTGCCGATATCGTCTACGTGCCCCTGGAGACGCCCCTGCTAGCAGCCGCCCGGGCACGCGAATTGCGCACAGTCGAGGGACTCGGGCTATTGCTGCACCAGGCGGTTCCCGGCTTCACCGCCTGGTTCGGCGTCGAGCCGACCGTTGACGATGAGCTCCGACGCTTCGTCGCCGCCGATCTGCTGGGCATATGA
PROTEIN sequence
Length: 280
MPILTGKARLAGILGWPVSHSRSPRLHGFWLERHGIDGTYVPLPVPPDDFAAAVRSLAALGFAGANVTIPHKLAAFAVCDAVDESARRAGAVNTLVFRDGRVEGSNTDGSGFIANLRAHGVDPAVGPALVLGGGGSARAVAAALQDAGARVSLANRTRARADALANDLPGLKVLDWNARHVALADHALVVNTTSLGMTGNPALELDLDRAPAGMAVADIVYVPLETPLLAAARARELRTVEGLGLLLHQAVPGFTAWFGVEPTVDDELRRFVAADLLGI*