ggKbase home page

SCN18_30_10_14_R2_B_scaffold_3302_3

Organism: CN18_30_10_14_R2_B_Alphaproteobacteria_67_12

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: comp(1553..2758)

Top 3 Functional Annotations

Value Algorithm Source
Pimeloyl-CoA dehydrogenase, large subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IMU2_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 403.0
  • Bit_score: 520
  • Evalue 1.50e-144
CaiA protein {ECO:0000313|EMBL:BAQ48920.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 403.0
  • Bit_score: 526
  • Evalue 1.70e-146
pimeloyl-CoA dehydrogenase large subunit similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 403.0
  • Bit_score: 520
  • Evalue 4.10e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 → SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGGACCTGCGCTTCACGCCGGAGGAACAGGCTTTTCGCGAGGAGGTTCGCGCCTTCATTCGCGAAAACCTGCCGAAGGACATCCGCGAGCGGATGTATCTCGGCGACAAGGCGAGCAAGGAGGACATCGTCACCTGGCAGCGCATTCTCAATAAGAAAGGCTGGGCGACCTATAGCTGGCCGAAGGAGTACGGCGGGCCGGGCTGGACGCCGATCCAGAAGATGATCTTCCTCGAGGAGAACCTGCTCGCGCCGGCGCCCGAACTGTCGGGCTTCAACATCACCATGATCGGCCCGGTGCTGATCCAGTTCGGCACCGAGGCGCAGAAGAAGAAATTCCTCCCGCGCGCGGCCAATCTCGATGATTGGTGGTGCCAGGGCTTCTCCGAGCCGGGCGCCGGATCGGACCTTGCCTCGCTGAAGACGTCGGCCAAGCGCGAGGGCGATCACTACGTCATCAACGGCTCGAAGATTTGGACCTCGACCGCGCATCTCGCGGATTGGGTGTTCCTGCTGGTGCGCACCAACCCCAACGCGCGCAAGCGGCAGGAGGGCATCTCGTTCATCCTGGTCGATATGAAGACGCCGGGTGTGACGGTGCGGCCGATCATCTCGATCGACGGCGCGCATCACCTCAACGAGACCTTCTACGACGACGTGCGCGTGCCGGTGGAGAATCTCGTGTACGTGGAGAACAAGGGCTGGGATGTCGCAAAATTCCTGCTCGGCAACGAACGAACCGGCATCGCGCGCATCGGCAAGTCCAAGGAGCGGCTGCGCTTCGCCGTCGAGCACGCGCGCGACATGCGCGCCGGCGGCAAGCCGCTGATCGAGGACCCGGCCTTCCGCCAGCGCGTCGCGCAGTTGGAAGTGGACGTGAAGGCGCTGGAAATCACGCAGAACCGCGTGGTGTCGGCCGCCGCCAAGCAGCAGGACGGCAAGCCCGACCCGCTGTCCTCGGCGCTCAAGATCAAGGGCTCGGAATTGCAGCAGCTCACCACCGAGCTCGCGATGGATGTCGGCGGGCCGCTGTCGATGCCGTTCTGGCACAAGAACGGCGAGACCCTGAGCAACGAGCCCGAGCTCGGGCCTGACTGGGCCTCGGAGGCGACGGCGGCGTATCTGTTCCTGCGCGCGGCCTCGATCTACGGCGGATCGAACGAGATCCAGAAGAACATTCTCACCAAGGCAGTGCTGGGGCTCTGA
PROTEIN sequence
Length: 402
MDLRFTPEEQAFREEVRAFIRENLPKDIRERMYLGDKASKEDIVTWQRILNKKGWATYSWPKEYGGPGWTPIQKMIFLEENLLAPAPELSGFNITMIGPVLIQFGTEAQKKKFLPRAANLDDWWCQGFSEPGAGSDLASLKTSAKREGDHYVINGSKIWTSTAHLADWVFLLVRTNPNARKRQEGISFILVDMKTPGVTVRPIISIDGAHHLNETFYDDVRVPVENLVYVENKGWDVAKFLLGNERTGIARIGKSKERLRFAVEHARDMRAGGKPLIEDPAFRQRVAQLEVDVKALEITQNRVVSAAAKQQDGKPDPLSSALKIKGSELQQLTTELAMDVGGPLSMPFWHKNGETLSNEPELGPDWASEATAAYLFLRAASIYGGSNEIQKNILTKAVLGL*