ggKbase home page

SCN18_30_10_14_R2_B_scaffold_249_15

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 11786..14884

Top 3 Functional Annotations

Value Algorithm Source
CzcA family heavy metal efflux pump n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKP9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 1027.0
  • Bit_score: 1320
  • Evalue 0.0
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:CPR17776.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 1019.0
  • Bit_score: 1326
  • Evalue 0.0
cobalt-zinc-cadmium resistance protein CzcA similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 1030.0
  • Bit_score: 1294
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3099
ATGCTACGCCGGCTTGTCGAATTCGCACTGAGTCAGCGCCTGCTGGTCCTGGTGCTGGCCTCCCTCCTGGCCGGGGCAGGGCTTTATGCTTTTTCCCGCCTGCCCATCGATGCTTATCCCGACATCTCGACCACCCAGGTCAAGCTGATCCTCAAGGCGCCCGGCATGACCCCCGAAGAGGTGGAGCAGCGCGTCATCGCGCCCCTGGAGCTGGAGCTTCTGGGCATTCCGGATCAGGTCATTCTGCGCTCGACCGCCAAATACGCCATCGCCGACATCACCATCGACTTCAAGGACAGCGCCGACGTTTACTGGGCTCGCCAGCAGGTGGGCGAGCGATTGGCCGGCGCGATGGCCGAGTTGCCCGACACGGTCAGCGGCGGCCTGGCGCCCATCGCCACGCCTTTGTCCGAGATCTTCATGTTCACTATCGAGGGCGGGTCGCTGAGCCTGGCGGAGCGGCGCACCCTGTTGGATTGGACGATACGGCCCGCCCTTCGCACCATACCGGGCGTTGCCGACGTCAACGCGTTGGGCGGCTATGTCGAAAGTTTCGAAGTGGTGCCGGACGATGCCGCGCTGCTGAGCGCGGGCCTGCGCGTGTCCGACATCAAGTCCGCCATCGAACAGGCCAACCGCAATGACGGCGCCGGACGGGTGGGCGAAGGCGAAGAGGCGCTGATCGTGCGAGCCGTGGGCGCGATCAAGACAGTGGAAGACCTTCGCCGGGTCATGGTCGCGGGCGGGAACGGCAAGGCCGTGCGCCTTGGCGATATTGCCCAGGTGCGCGTGGGCGCGCTAACCCGCTATGGCGCGGTCACGCAGGACGGCAAGGGTGAGACGGTAGAAGGCTTGGTCCTGGGCCTGCGTGGTGCGGACACGGGCGCGGTGGTGGCCGGGGTGCGCGCCAAGCTGGCGGAGCTGGAAGCCGACATGCCCAAAGGCGTCAAGCTTCACGCCTTCTATGATCGCGCGGACCTGATCAGCAAGGCGGTGTCGACGGTGCAGCATGCCTTGATCGAGGCCACCGTTCTGATCGTGATCCTGCTGCTGTTGTTTTTGGGAAATCTGCGTGCCGCCATCGTGGTGGCCCTGACCTTGCCCTTTGCCGCGATCACGACATTCCTTCTGATGTCGATCTTCGGCCTTAGCGCCAATCTGATGAGTCTGGGTGGCCTCGCCATCGCCATCGGCATGCTGGTCGATGCCGCCGTGGTGGTGGTGGAAAACACCGTGGAAAGCCTGGCGCATCAGGGACCGGCAAGCCGGCTTCCCCGCTTGCATCTGGTCTACCGGGCGACCTCCGAAGTGGCGGTGCCGGTGGCGTCGGGGATCGTGATCATCTGCCTGGTGTTCCTGCCGCTTCTGTCCTTGCAGGGGCTGGAAGGAAAGCTTTTCGCGCCCGTGGCGTTGACGATTGTTTTCGCCCTGTCCGGTTCGCTGCTGCTGTCGCTGACCTTGATACCGGTCATCGCCTCCTTGCTGCTGAAGAGCGGCGCGCATGGAGACGCCTGGCTGATGCGCAAGCTGACGCCGGCTTACGCGCACCTGTTGGGGAAGGCCCTGGCGAAGCCGCGCCGGATGTTCCTGGGCGTGGGCGCTGTCTTTGCGCTCGCTGCCCTGGCGTACATCCTGGTCGGCAAGACCTTCATGCCCACGATGGACGAAGGCTCCATCGTGGTCCAGCTGGCCAAGCTTCCCACCATCAATCTGGAACGAACCGCGCAAGTGGATAAGGCCGTGCAGCAGGCGATCATGGCGCGGGTGCCGGATGTGGTGGAAGCCATCGCCCGCACCGGCACCGACGAGATCGGCCTGGATCCGATGGGGCTGAACGAAACCGATCTCTTCCTGATGCTGGCACCCCGGGAGAAATGGAAGGCGCCCAGCAAGGACGCCATGGTGGAGCAGATCCGCGAAGTGATGAAGGATTTTCCCGGCGTCGAATATACCTTCACCCAACCTATCGAAATGCGGACCTCCGAAATGCTCACCGGAAGCCGCGGCGATCTCGCCATCAAAGTGTTCGGGCCGGATCTGGCGGTGCTGGGTCGGCTGTCCGAAGAAATCCGCGCTGCGGTGTCAAAAGTCCCTGGCGCGACCGAAGTCTTCACTGTCGCCGATGACAAGGTGCGCTATCTTCAGACCGATATCGACCGCATGGCGGTGGGCGCGGCCGGGCTTTCGACCCAGACCCTGCAGGAGGAAATGCGCGCCAGGCTGGAAGGGTTGGGCGCGGGTATCGTCACCGACAATCAGCGGCGCATTCCCATCCTGATCCGTGGCGGCGACGATCTGCATACCAGGCCGGAATTGTTCGGCGATGTGGGCGTGGCCACCGAGAGCGGCGGGATCGTGCATATCGCCGATGTCGCGCGCATCACCCAGCCGGAAGGTCCGGTCCGCATCCAGCGGGAGAATGCCTCGCGCTTCGGCACCGTCCAGGCCAATGTTTCCGGGCGCGATCTCGTTGGCTTTGTCGAAGCCGCGCAGGCTGCCGTGGCGCAAACGATCAAGCTGCCCACCGGCTACAAGCTGGAATGGAGCGGGGAATTCCAGAACCAGCGCCGCGCCGCCCAGCGGCTGATGGTGGTGGTGCCTTTGGCGCTGGGGCTGATCTTCCTGGTGTTGTTCGCCACCTTGGGTTCGGTGCGCCAGTCGCTTCTCATCCTGGCCAACATTCCGCTCGCGCTGGTGGGCGGAATGCTGCTGCTTTGGGTGTCTGGAGAATATCTTTCGGTTCCAGCCTCGGTGGGTTTTATCGCGCTTCTGGGCATCGCCGTTCTCAACGGCCTGGTCCTGATCGTGTACTTCAACCAGCTTCGCAGCCAGGGCATGCCCATCCATCAGGTGGTCTATGACGGCGCCCGGCGGCGGCTGCGTCCGGTCTTGATGACCGCCAGCATCGCGGCGCTGGGCCTGGTGCCGCTGCTGTTCGCCACCGGGCCGGGATCGGAGATTCAGAAGCCGTTGGCGATCGTGGTGATCGGAGGGCTGATCAGCTCCACCATCCTCACATTATTTCTTTTGCCGATTCTGTTCGCCCGCTTCGGCGTTCCTCCGTCCGAAAGCGCCGCGCGAAAGGATGGTGTGGCATGA
PROTEIN sequence
Length: 1033
MLRRLVEFALSQRLLVLVLASLLAGAGLYAFSRLPIDAYPDISTTQVKLILKAPGMTPEEVEQRVIAPLELELLGIPDQVILRSTAKYAIADITIDFKDSADVYWARQQVGERLAGAMAELPDTVSGGLAPIATPLSEIFMFTIEGGSLSLAERRTLLDWTIRPALRTIPGVADVNALGGYVESFEVVPDDAALLSAGLRVSDIKSAIEQANRNDGAGRVGEGEEALIVRAVGAIKTVEDLRRVMVAGGNGKAVRLGDIAQVRVGALTRYGAVTQDGKGETVEGLVLGLRGADTGAVVAGVRAKLAELEADMPKGVKLHAFYDRADLISKAVSTVQHALIEATVLIVILLLLFLGNLRAAIVVALTLPFAAITTFLLMSIFGLSANLMSLGGLAIAIGMLVDAAVVVVENTVESLAHQGPASRLPRLHLVYRATSEVAVPVASGIVIICLVFLPLLSLQGLEGKLFAPVALTIVFALSGSLLLSLTLIPVIASLLLKSGAHGDAWLMRKLTPAYAHLLGKALAKPRRMFLGVGAVFALAALAYILVGKTFMPTMDEGSIVVQLAKLPTINLERTAQVDKAVQQAIMARVPDVVEAIARTGTDEIGLDPMGLNETDLFLMLAPREKWKAPSKDAMVEQIREVMKDFPGVEYTFTQPIEMRTSEMLTGSRGDLAIKVFGPDLAVLGRLSEEIRAAVSKVPGATEVFTVADDKVRYLQTDIDRMAVGAAGLSTQTLQEEMRARLEGLGAGIVTDNQRRIPILIRGGDDLHTRPELFGDVGVATESGGIVHIADVARITQPEGPVRIQRENASRFGTVQANVSGRDLVGFVEAAQAAVAQTIKLPTGYKLEWSGEFQNQRRAAQRLMVVVPLALGLIFLVLFATLGSVRQSLLILANIPLALVGGMLLLWVSGEYLSVPASVGFIALLGIAVLNGLVLIVYFNQLRSQGMPIHQVVYDGARRRLRPVLMTASIAALGLVPLLFATGPGSEIQKPLAIVVIGGLISSTILTLFLLPILFARFGVPPSESAARKDGVA*