ggKbase home page

SCN18_30_10_14_R2_B_scaffold_490_2

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(1578..2756)

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289F4EA similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 379.0
  • Bit_score: 418
  • Evalue 5.90e-114
secretion protein HlyD family protein similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 376.0
  • Bit_score: 407
  • Evalue 3.80e-111
Secretion protein HlyD family protein {ECO:0000313|EMBL:ABQ69576.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 376.0
  • Bit_score: 407
  • Evalue 1.90e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGAGCGATGCCAGCAACAACAACGCTTCCCGCCGCCGGCGCGGTTTTCTCATCTTCGGCGCGATTATCGTGATCGCCGCTTTGGCCTATGGCGCCTATTGGTTCTTCGACGCCCGTTTTTATGAAACCACGGACGACGCCTATGTGAGCGGCAATATCGTGGCCGTTACCAGCCGCGAAAATGCGACGGTAATGGCCCTGCATGTCGACAACACCCAGTCGGTGCGGCGCGGCCAGCTCTTGATGGAAATGGACCCGTCGGTGGTGAATGTGAATCTGGCTTCGGCCGAGGCCAATCTGGCGCGCGCCATCCGCACCGTGAAAGGCGAATTCTCCCGCGCGCAAAGCTCCGGCGCCCAAGTGGCGCAGGCGGAAGTGGCGCTCTCACTGGCGCGCACCGACTATCAGCGCCGCCAGCAGGCGGCCAAGGATGGCGCGGTTTCGGCCGAGGAATTGGCGCATGCCCGCGACAATGTCCGCGCCGCGGAAGCGGCGGTCGCCTCGGCCCAGGGCGGGCACCAGCAGAGCCTCTCCCAGATCGCCGGGACCGATATCGCCAACAATCCTGATGTTCTCGCCGCGGAAGCCAGCCTGCGCTCGGCCGCGATCGCCCAAAGCCATATGCGCATCGTCGCGCCCGTCGATGGCGTGATCGCCCAGCGCACCGTGCAGGTGGGCCAGCAGGTCGCGGCCGGCACGCCGCTCCTGGCGGTGGTTTCGCTCAGCAATGTCTGGGTCGACGCCAATTTCAAGGAAGGCCAGCTGCAGCATATGCGCATCGGCCAGCCGGTCACCGTCAATGCCGACATTTATGGCGGCAAGGTCACCTATCGCGGCAAGGTCGAAGGCTTGGGCGCGGGATCGGGCAGCGCCTTTGCGCTGCTCCCGCCCCAGAATGCCAGCGGCAACTGGATCAAGATCGTGCAGCGTGTGCCTGTTCGCATCGCGCTCGATCCGGAGGATGTGGCGGCCCATCCCTTGCGCATCGGGTTGTCGGTCAGTGTCAGCGTTTCGATCAAGGATACTTCCGGTCCGCAAGTGACGTCGCGGGTGGGAGCGGGATCGACCACGGCGGATCTCGGCGATGACGCCAATGCCAAGGCGGATGGGATCATCGCCCGCATCCTGGCCGAGAATGGCGCCACGAACGGCACTACCCAGGCCACGGTCCACAAATGA
PROTEIN sequence
Length: 393
MSDASNNNASRRRRGFLIFGAIIVIAALAYGAYWFFDARFYETTDDAYVSGNIVAVTSRENATVMALHVDNTQSVRRGQLLMEMDPSVVNVNLASAEANLARAIRTVKGEFSRAQSSGAQVAQAEVALSLARTDYQRRQQAAKDGAVSAEELAHARDNVRAAEAAVASAQGGHQQSLSQIAGTDIANNPDVLAAEASLRSAAIAQSHMRIVAPVDGVIAQRTVQVGQQVAAGTPLLAVVSLSNVWVDANFKEGQLQHMRIGQPVTVNADIYGGKVTYRGKVEGLGAGSGSAFALLPPQNASGNWIKIVQRVPVRIALDPEDVAAHPLRIGLSVSVSVSIKDTSGPQVTSRVGAGSTTADLGDDANAKADGIIARILAENGATNGTTQATVHK*