ggKbase home page

SCN18_30_10_14_R2_B_scaffold_490_28

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(28596..29762)

Top 3 Functional Annotations

Value Algorithm Source
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 378.0
  • Bit_score: 355
  • Evalue 8.50e-95
Lipid-A-disaccharide synthase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4M5_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 379.0
  • Bit_score: 336
  • Evalue 2.90e-89
lpxB; Lipid-A-disaccharide synthase similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 379.0
  • Bit_score: 336
  • Evalue 8.20e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGCCCGCGCAACGTCCGAAAACCCTGATGCTGGTGTGCGGGGAAACGTCGGGCGATCTTCTGGGCGCGCAATTGATGGCGGGCATCCGGCGCCTGGCCGGCGACCGGGTGAAGATCGTGGGCGTGGGCGGCCCGGCCATGGCGCGCGAAGGGCTGGAAAGCCTGTTTCCGCTCGACGCCACGGCCGTGATGGGCCTGCGCGAAGTGGTGCCCGCCATTCCCAGGATATTGGCGCGGGTGCGCCAGGCCGCGGATTATGCAATCGCCGTCCATCCCGATGCGTTGGTGGTGATCGACAGTCCCGACTTCACCCACCGCATCGCCAAGGCGGTGAAAAAGCGCGATCCCTCGATCAAGACGGTCAATTATGTGGCACCGCAGGTCTGGGCCAGCCGCGCCTATCGCGCCAAGGCGATGGCCCGCTATTTCGACCTGATATTGGCGCTGTTCCCTTTCGAGGTGCCGTTCTTCGAGAAATACGGATTGCGGGCCGCTTTCGTCGGCCATCCGGTGGTGGAACGGCGTGTCCGCATGACCGGCGGCGATGCCTTGCGGGCGCGTCTGGGCATCGGCGCGGACGCGCCGCTTCTGGCGCTTCTGCCCGGCAGCCGCTCGAGCGAGATCCGCTTCATTTTCCCCGTCTTCCGCGACGCGGTGCGGCTGTTGGCGGCGAAGATCCCGGGCCTGGTGACGGTGCTGCCGACCGTGCCGCATGTCGCCGCCAAGGTGCGCGAAGCCGCATCGGGCTGGCCGACGCCGCTGCATATCCTGGAAAATGAAGCCGACAAATACGCCGCCTTCGATGCCGCCGATGTGGCATTGGCCGCGTCGGGAACGGTAACGGCGGAGCTTGCCTTGTCACGCACCCCCATGGTGGTGGCGTACCGGGTGGGCGGGCTGACTTTTGCCTTGGCCAACCGCTTGATGACGGTGCCCTACATGACCCTGATCAATATTCTTCTGGGGCGCCGGGCGGTCCCGGAATTCAAGCAATATGACGCCACGCCCGAAGCGTTGGCCGGCGAGGTTGCGCACCTGTTTGCGGATAAGGGCGCGCGCAACGCGCAGATCGATGCCATGAATGAATTCGGGCGGCGGCTGGGAGAGGATGAAGAAGCCCCCTCCCAGCGCGCCGCCCGTGTTCTGCTAAACTTTATCGACGCCTGA
PROTEIN sequence
Length: 389
MPAQRPKTLMLVCGETSGDLLGAQLMAGIRRLAGDRVKIVGVGGPAMAREGLESLFPLDATAVMGLREVVPAIPRILARVRQAADYAIAVHPDALVVIDSPDFTHRIAKAVKKRDPSIKTVNYVAPQVWASRAYRAKAMARYFDLILALFPFEVPFFEKYGLRAAFVGHPVVERRVRMTGGDALRARLGIGADAPLLALLPGSRSSEIRFIFPVFRDAVRLLAAKIPGLVTVLPTVPHVAAKVREAASGWPTPLHILENEADKYAAFDAADVALAASGTVTAELALSRTPMVVAYRVGGLTFALANRLMTVPYMTLINILLGRRAVPEFKQYDATPEALAGEVAHLFADKGARNAQIDAMNEFGRRLGEDEEAPSQRAARVLLNFIDA*