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SCN18_30_10_14_R2_B_scaffold_296_4

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 2506..2751

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036B5510 similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 72.0
  • Bit_score: 132
  • Evalue 1.00e-28
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 80.0
  • Bit_score: 132
  • Evalue 2.40e-28
hfq; RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 80.0
  • Bit_score: 130
  • Evalue 1.90e-28

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGAGCGAAAAACAACAAAATCTGCAAGACACGTTTCTCAACGCCGTCCGTAAAAGCAAATCCCCCGTCACCATCTTTCTCGTCAATGGCGTGAAGCTCCAAGGCAACATCACCTGGTTCGACAATTTCTGCGTGCTTTTGCGCCGCGACGGTCAGGCCCAGCTTGTCTACAAGCATGCCATCTCGACCGTGATGCCGATGGGTCCGATCCAGCTTCAGGATGAAGCGGCACACGAGTCCGCCTGA
PROTEIN sequence
Length: 82
MSEKQQNLQDTFLNAVRKSKSPVTIFLVNGVKLQGNITWFDNFCVLLRRDGQAQLVYKHAISTVMPMGPIQLQDEAAHESA*