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SCN18_30_10_14_R2_B_scaffold_297_24

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 22486..22902

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW84_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 138.0
  • Bit_score: 223
  • Evalue 1.30e-55
TraR/DksA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 138.0
  • Bit_score: 223
  • Evalue 3.60e-56
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 138.0
  • Bit_score: 223
  • Evalue 1.80e-55

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGGGAATCCAGATCCCGGCCGACTACCGGCCGCAGGAAAACGAACCCTTCATGAATGAAAAGCAGCGGGAATATTTTCGCCGCAAGCTGAACAATTGGAAGGAAGAGATCCTCAAGGAAAGCCGCGAAACGATCCAGAATCTTCAAGCGGAAACCATTCCGCATGCCGATCTGGCCGACCGCGCGTCCACCGAGGCCGAACGGCAGCTCGAGCTGCGCACCCGCGACCGCCAAAGAAAACTGATCGCCAAGATCGACGCCGCGCTGCGCCGGATCGAGGATGGTTCTTACGGCTTCTGCGAGGAAACCGGCGAGCCGATTTCCCTCAAGCGCCTGGACGCGCGTCCCATCGCGACCTTGTCGATCGAAGCGCAAGAGCGCCACGAGCGTCGCGAAAAAGTTTACCGGGACGATTAA
PROTEIN sequence
Length: 139
MGIQIPADYRPQENEPFMNEKQREYFRRKLNNWKEEILKESRETIQNLQAETIPHADLADRASTEAERQLELRTRDRQRKLIAKIDAALRRIEDGSYGFCEETGEPISLKRLDARPIATLSIEAQERHERREKVYRDD*