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SCN18_30_10_14_R2_B_scaffold_540_23

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(26939..27880)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000313|EMBL:CDO59858.1}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 331.0
  • Bit_score: 332
  • Evalue 4.70e-88
tRNA pseudouridine synthase B n=1 Tax=alpha proteobacterium BAL199 RepID=A8TYZ8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 317.0
  • Bit_score: 322
  • Evalue 3.50e-85
tRNA pseudouridine 55 synthase similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 326.0
  • Bit_score: 315
  • Evalue 1.20e-83

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGGGTAAAAAGAAAAAAGGCGATGCCGTTCACGGCTGGGTCGTTCTCGACAAGCCGTCCGGCGTCACCTCGACCCAGGCCGTCGCCGCCGTCCGCCGCATCTTCAATGCGCAGAAGGCGGGCCATGCCGGCACCCTCGACCCCCTGGCGACCGGCATCCTCGCCATCGCCCTGGGCGAGGCGACCAAGACCGTGCCGTACGTCCAGGATGCCGCGAAGATCTACCGCTTCACCGCCACCTGGGGCGAAAGCCGCGACAGCGACGATGCCGAAGGCAAGGTGACCGGCACGTCCGATGTGCGCCCCAGCCGGGAGGCCATCGAAGCCATGATCCCCCGCTTCACCGGCGTCCTGACCCAGACCCCGCCCGCTTATTCGGCCATCAAAGTGCAGGGCGAACGGGCCTATGACCTGGCCCGGCAGGGGGAGGAAGTCGCCCTGGAACCCCGTCAGGTCCAGGTCTATGAGGCCCGGCTGGTGGACGCCCAGCCCGGTCAGGCGGTGTTCGAAATCCTTTGTGGCAAAGGGACTTACGTCCGCTCCTGGGTCCGGGACATTGCCCAGGCCCTGGGGACTTTGGGCTATGTCTCCCAGCTCCGGCGGACCCGGATCGGGGGCTTCCTGGAAAAAGACGCGGTCGGGCTGGAAACGCTGACCCCTTTTATGCATAGTCCCGCCGCTTTTGCGTATCTAAAGCCTCTTTCGACCGCGCTGGACGGCATCCCGGCGCTGGCCGTGACGGGCAGCGATACGGTCCGCCTTCGCAGCGGCAATTCCATCCTCATTCGCGCGAATTTGTTCGCCCGCATGAAAGAAGGATTCGCAGGCGATGGCGGGCTCCAGGGGCAGACCGTCTTCCTCAAGGACGAGACGGACGCGCCCGTGGCACTGGCCGAAATCGCCGATGGCGAACTTCGTCCCTTCCGTGTTTTCCAACTTTAA
PROTEIN sequence
Length: 314
MGKKKKGDAVHGWVVLDKPSGVTSTQAVAAVRRIFNAQKAGHAGTLDPLATGILAIALGEATKTVPYVQDAAKIYRFTATWGESRDSDDAEGKVTGTSDVRPSREAIEAMIPRFTGVLTQTPPAYSAIKVQGERAYDLARQGEEVALEPRQVQVYEARLVDAQPGQAVFEILCGKGTYVRSWVRDIAQALGTLGYVSQLRRTRIGGFLEKDAVGLETLTPFMHSPAAFAYLKPLSTALDGIPALAVTGSDTVRLRSGNSILIRANLFARMKEGFAGDGGLQGQTVFLKDETDAPVALAEIADGELRPFRVFQL*