ggKbase home page

SCN18_30_10_14_R2_B_scaffold_540_25

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(28540..31065)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-2 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=IF2_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 891.0
  • Bit_score: 1015
  • Evalue 2.30e-293
translation initiation factor IF-2 similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 891.0
  • Bit_score: 1015
  • Evalue 6.60e-294
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 891.0
  • Bit_score: 1015
  • Evalue 3.30e-293

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2526
ATGACCGATACCGACGAGACCAAGCGCCCCAAAACGCTGTCGCTGAAGAAGACGGAGACGTCCACCGTCAAGCAGAGCTTCAGCCATGGCCGCACCAAGGCCGTGGTGGTCGAGAAGAAGCGCACTCTGGGCGCGCCCGCTCCGGCCAAGGCGGGCGGCGACAAGTCCGCGCGTACCGACAAGCCGGCTCCCGCGCCGGTTGAAGCCGCCAAGCCGGCCGCGAAAGCCGCCGCGCCCGCGCGCGGCGTGGTGCTGCGCCAGCTTTCGGATGAAGAAAAGGCTCGCCGCGCCGCCGCCATCGCCGACGCCCGGGTGTCCGACAGCGAAGCCCGCCGCCAGGCCGAAGCCGAAGCCGCGCGCCGCGCCGCCGAAGAAGAATTGATGAAGGCGGAACGCGCCGCCGCCGAAAAGCGCAAGATCGAGGAAGAAGCGCGCAAGGCCGCCGAGGCCGAAGCCCGCCGCCATGCCGAACAGGAAGCCGCGCGCCGTGCCGAGACCAAACCTGCGGTCGCTCCGGTCGAAGCCGCCCGCCGCCGCCCGGTGCAGGAAGAAGAAGAAGAAAACACCACCAAGAAGATCGGCAACAAGATCGTGCCGGTGAAGGCGCCCGCGCCCAAAAAGGCCGGCGAGGGCGAGCGCCGCCGCGGCAAGCTCACCGTGACGCGCGCTCTGTCCGACGATGATGAGCGCACCCGCTCGGTCGCCGCCTATCGCCGTCATCTGCAGCGCGTCAACAAGGGCCATCAGGTGCAGCAGGCCGGCCCCGCCGGTCCGCGCGACATCGTGATCCCGGAAACCATTTCGGTTTCCGACCTGGCCAACCGCATGGCGCGCCGCGCCGTGGACGTGATCAAGGTCTTGATGAAGAACGGCATGATGGCGACGCCGAACGACGTCATTGATGCGGACACCGCCGAACTGGTGGCCACCGAATATGGCCATGTGGTCAAGCGCGTCGCCGAAAGCGATGTGCTGGAAGGCCTGACCGGTGCCGCCGACCAGGACGACACCCTGCTGCCGCGTCCCCCGGTGGTCACCGTTATGGGCCATGTCGACCATGGCAAGACCTCCCTGCTCGATGCGCTCCGCAAGACCGACGTGGCCGCGGGCGAAGCGGGCGGCATCACCCAGCATATCGGCGCCTATCAGGTGAACCTGAAGAGCGGCCAGAAGATCACGTTCCTCGACACGCCGGGCCATGCCGCCTTTACCCAGATGCGCGCGCGCGGCGCCAAGGTCACCGACCTGGTGATCCTGGTGGTGGCGGCCGATGACGGCGTGATGCCCCAGACCGTGGAAGCCATCGCCCATGCCAAGGCGGCGGGCGTGCCCATGATCGTGGCGGTCAACAAGATCGACAAGGGCGACGCCAATCCCACCCGGGTCAAGACCGAACTTCTGCAACACGAAGTTCAGGTCGAAGACATGGGCGGCGAAACCCAGGTGGTCGAAGTCTCGGCCACCAAGGGCATGAATCTCGACAAGCTGGAAGAGGCGATCCTGCTGCAGGCGGAAATCCTCGACCTCAAGGCCAACCCGGAACGCAGCGCCGAAGGCGCGGTGATCGAGGCCAAGCTGGACAAGGGCCGCGGTCCCGTCGCCACCGTGCTGGTGCAGCGCGGCACCTTGAAGGTGGGCGACATCGTGGTCGCGGGTTCCGAATGGGGCCGGGTGCGCCTGCTGCAGAATGATCGCGGCGAGACCGTGAAATCCGCCGGCCCCTCGGCGCCGGTGGAAGTGCTGGGCCTGTCCGCGCCGCCGGAAGCGGGCGATGAAATGGTGGTGGTGGAATCCGAAGCGCGCGCCCGTGAAGTGGCGGAGTACCGCGCCAGGAAGCGCCGCGAATCCCGCCAGGCCAGCAATTCGCGCCAGACTTTGGATCAGCTGCTCAAGACCCGCGAAGTCGGCGAGAAGAAATTGCTGCCGCTGGTGTTGAAATCCGACGTGCAAGGTTCGGTCGAAGCCATTCAGGGCGCCCTGGCCAAGCTCGGCACCGACGAAGTGGGCGTGCAGATCCTGCAGGCCGGCGTGGGCGGCATCACCGAAAGCGACGTGATCCTGGCGCATGCCTCGGGTGCCGGCGTGATCGGATTCAATGTCCGCGCCAACAACCAGGCCCGCGACCGCGCCAAGCGCGACGGCGTCGATATCCGCTATTACAGCATCATCTACAACGTGGTGGACGACATCAAAGCGGCGCTGTCCGGCATGCTGGCGCCGGAAACGCGCGAGAAGTTCCTGGGCAATGCGGAAATCCTGGAAGTCTTCGCCATCACCAAGGTGGGCAAGGTGGCGGGCTGCAAGGTCACCGAAGGCCTGGTGCGCCGCGGCGCCAAGGTGCGCCTGATCCGCGACAATGTGGTGATCCACGAAGGCGATCTGTCGACGCTCAAGCGCTTCAAGGACGAAGTGAAGGAAGTCCAGGTCGGCCAGGAATGCGGCATGGCCTTCACCAATTACCAGGACATGCAGAAGGGCGACGTCATCGAGTGTTTCGAGATCGAAACCATCCAGCGCGCGCTCTAA
PROTEIN sequence
Length: 842
MTDTDETKRPKTLSLKKTETSTVKQSFSHGRTKAVVVEKKRTLGAPAPAKAGGDKSARTDKPAPAPVEAAKPAAKAAAPARGVVLRQLSDEEKARRAAAIADARVSDSEARRQAEAEAARRAAEEELMKAERAAAEKRKIEEEARKAAEAEARRHAEQEAARRAETKPAVAPVEAARRRPVQEEEEENTTKKIGNKIVPVKAPAPKKAGEGERRRGKLTVTRALSDDDERTRSVAAYRRHLQRVNKGHQVQQAGPAGPRDIVIPETISVSDLANRMARRAVDVIKVLMKNGMMATPNDVIDADTAELVATEYGHVVKRVAESDVLEGLTGAADQDDTLLPRPPVVTVMGHVDHGKTSLLDALRKTDVAAGEAGGITQHIGAYQVNLKSGQKITFLDTPGHAAFTQMRARGAKVTDLVILVVAADDGVMPQTVEAIAHAKAAGVPMIVAVNKIDKGDANPTRVKTELLQHEVQVEDMGGETQVVEVSATKGMNLDKLEEAILLQAEILDLKANPERSAEGAVIEAKLDKGRGPVATVLVQRGTLKVGDIVVAGSEWGRVRLLQNDRGETVKSAGPSAPVEVLGLSAPPEAGDEMVVVESEARAREVAEYRARKRRESRQASNSRQTLDQLLKTREVGEKKLLPLVLKSDVQGSVEAIQGALAKLGTDEVGVQILQAGVGGITESDVILAHASGAGVIGFNVRANNQARDRAKRDGVDIRYYSIIYNVVDDIKAALSGMLAPETREKFLGNAEILEVFAITKVGKVAGCKVTEGLVRRGAKVRLIRDNVVIHEGDLSTLKRFKDEVKEVQVGQECGMAFTNYQDMQKGDVIECFEIETIQRAL*