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SCN18_30_10_14_R2_B_scaffold_540_28

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(33323..33880)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP (Fragment) n=1 Tax=uncultured bacterium RepID=K2AH47_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 187.0
  • Bit_score: 167
  • Evalue 8.50e-39
Ribosome maturation factor RimP {ECO:0000256|SAAS:SAAS00001667}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 187.0
  • Bit_score: 167
  • Evalue 1.20e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 167.0
  • Bit_score: 159
  • Evalue 6.60e-37

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GTGTATTGCCCCAGCATTGGGGCCTGGAACTTGGAGACGCTCATTTTCGCCGCCGCATCGCATCTGGAACCGGTGTTCGAACCCGTCATTGAAAAGGCGGGGTTCAAGCTGGTGCGCCTGCGCATCATGGGCGGAGCGTCCAAGACCTTGCAGATCATGGCCGAGCGGCCCGACGGCAGCATGGATGTGGAAGGCTGCACGGAGCTTTCCCACGCGCTGCTCGATTTCATCGAAACGGAAGATCCCATCGAAGGCGATTACGAAATCGAAGTCTCCTCGCCGGGGATCGACCGGCCGCTGACCCGTCTTGCCGATTTCACCCGCTGGAAGGGGCACGAGGCCAAGATCGAGCTCAATGCCCCGGTGACCATCGCCAATGGGGCAGGGCGCAAGCGGTTCCGCGGCACGCTCGAAGGGCTCGACGGCAACGATGTCGTGATCACGTCGCAGGGCGCGCGCATACAATTTCCGTTCCGCTCCATCTTGGAAGCGAAACTCGTTCTCACCGACAAGCTCATTCAGGAAGATTTGAAGGCGCGCAAGAAGGCGCCGAACTAG
PROTEIN sequence
Length: 186
VYCPSIGAWNLETLIFAAASHLEPVFEPVIEKAGFKLVRLRIMGGASKTLQIMAERPDGSMDVEGCTELSHALLDFIETEDPIEGDYEIEVSSPGIDRPLTRLADFTRWKGHEAKIELNAPVTIANGAGRKRFRGTLEGLDGNDVVITSQGARIQFPFRSILEAKLVLTDKLIQEDLKARKKAPN*