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SCN18_30_10_14_R2_B_scaffold_607_18

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(12979..13905)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00036998DE similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 307.0
  • Bit_score: 360
  • Evalue 1.50e-96
HTH-type transcriptional activator NagR {ECO:0000313|EMBL:KEC80571.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 301.0
  • Bit_score: 362
  • Evalue 4.20e-97
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 301.0
  • Bit_score: 355
  • Evalue 7.90e-96

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGAATTTTGGGGCATTCGATCTCAACCTGTTGCGGGTGTTCGATGCTCTGGTGCGCGAGCGCAGCGTCACCAGGGCCGGTGACCAGATCGGCCTGTCGCAACCGGCGGTCAGCCAGGCGCTGGGCCGCCTGCGCGCCCTGCTGGACGATCAACCGTTCGTGCGGCGCGGGACCGAAATGGCCCCCACGCCGCGCGCCGAGGAGATCGCGCCGGTAATCCGCCAGGCCCTGGGTCAGGTGGAGCAGGCGCTGGCGGGTGCGCGCCGCTTCGATCCGGCAACGCTCAATCGGACCTTCTCCCTGATCGGCGCCGATTTCGTTTCTCTTCTGATGATACCGCCGCTGTACGCGCGCATCGCCGCCGAGGCGCCGTGCGTGCGGTTGCGGCTGGTCGACACCGCGCGCGGCGAGGTCGAACGCCTGCTGCAGGATGATGCCGTCGATCTGGCGGTGGAGCGGCCGCTGACCGTGCCGGACTGGGTTGCGCGCGAGCCGGTGTTCGGTTCGCCCTTCGCGCTCATCGCGGCCGCGAATAATCCTCAGATCGCGGCGGCGGGTGTCGGGCCGGGCGAGGCCTTGCCGCTGGACCTGTTCTGCCGCTTGCCGCACGGCATCCGCTCGATCGACGGCAGCATGAGCGGCTGGATCGACGAGGCCCTGGCGGAAGTCGGCCGCACGCGCACGGTTGTGTTGGCCCTGCCGCAATTCGCGGGCGTTTGCCTGGCGGTGGCGCAGAGCGATTTGATCGCGGCCATCCCGATGCAGTTCGCCGAAGCCTGTGCCAAGCCCATGGGGCTGGCCATCTATGCGCTGCCGATGCCGACCGGCGCGCCGGACATTTCCATGTATTGGCACAGCCGCCACACCAACAATCCCGCCCATCGCTGGCTGCGCGATCATGTGCGGGCGGTGGCGGCGGCGTTCTAG
PROTEIN sequence
Length: 309
MNFGAFDLNLLRVFDALVRERSVTRAGDQIGLSQPAVSQALGRLRALLDDQPFVRRGTEMAPTPRAEEIAPVIRQALGQVEQALAGARRFDPATLNRTFSLIGADFVSLLMIPPLYARIAAEAPCVRLRLVDTARGEVERLLQDDAVDLAVERPLTVPDWVAREPVFGSPFALIAAANNPQIAAAGVGPGEALPLDLFCRLPHGIRSIDGSMSGWIDEALAEVGRTRTVVLALPQFAGVCLAVAQSDLIAAIPMQFAEACAKPMGLAIYALPMPTGAPDISMYWHSRHTNNPAHRWLRDHVRAVAAAF*