ggKbase home page

SCN18_30_10_14_R2_B_scaffold_990_2

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 857..1018

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 53.0
  • Bit_score: 105
  • Evalue 1.60e-20
isopropylmalate isomerase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 53.0
  • Bit_score: 102
  • Evalue 2.70e-20
3-isopropylmalate dehydratase large subunit n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MNY3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 53.0
  • Bit_score: 102
  • Evalue 9.60e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 162
ATGAATGCCGACAAGCTGCAGCCGGGCGAGCGTTGCGCCTCGACCTCGAACCGCAATTTCGAAGGCCGTCAGGGCCGTGGTGGGCGCACGCATCTGGTGTCGCCCGCGATGGCGGTTGCGGCGGCGGTGACCGGACATCTCACAGACGTGCGTTCGCTTTAA
PROTEIN sequence
Length: 54
MNADKLQPGERCASTSNRNFEGRQGRGGRTHLVSPAMAVAAAVTGHLTDVRSL*