ggKbase home page

SCN18_30_10_14_R2_B_scaffold_990_13

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 15790..17265

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Caulobacter crescentus OR37 RepID=R0D1E3_CAUCE similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 458.0
  • Bit_score: 466
  • Evalue 3.10e-128
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:ENZ82260.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 458.0
  • Bit_score: 466
  • Evalue 4.30e-128
nodT; RND efflux system, outer membrane lipoprotein, NodT similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 471.0
  • Bit_score: 450
  • Evalue 4.90e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
ATGACCGTACGGTACAGTTTTATGATAACGCGAAAGTCTGCCAAGCTTTTGACGGGCGTGGCCCTTTTGGGTCTTGCCGCCTGTGCCCCCGATCTCGGTCCCTTGCCGGTCGCGAAGACGCCGGATGCTTACGCCGTACAAAAAACTTTCGATGCCGCGGCGGCCGATTGGCCGGCGGAAAGCTGGTGGACGGCGTATGGCGATGCGCAACTCGATACCTTGATCGCCGAAGGCTTGGCCGATGCGCCGGATCTGAAACGCGCCGAAGCGCGGCTGCGCCAGGCCGACGCGCTGGCGCAGCAGGCGGGCGCCAGCCGTTATCCCAACATCACCGCCAACAGTTCTTTCACCGAAACCCGCAACAGCCTCAATCAGGGTTTTCCGGCCGCCTTCCAATCTTTCCTGCCGCACGGCTATCACGACAATGGCCGCATCACCGGAGACGCCAGCTACAATCCGGATTTCTTCGGCAAGAACCGCGCCACCTTCGCGGCGGCGACGTCGGAAGCCGACGCGGCGCGGGTGGATCTGGCGGCGGCCAAGCTCACTTTGTCCTCGGCCATTGCCAATGCCTACGCCAATCTGGTGCAGCTGGCAGCCGACCGCGAAGCGGCGGTGGATGCGCTCAATGTCCGCAAGCAAAGCGCCGATCTTCTCAGCCAGCGCTTCTCGCAGCAGCTGGAAAACACCAGCACGGTGTCCGAAGCCAAGTCGCGCAGCTTTGCCGCCGAAGCGGAACTGGACCGGATCGACGGGCAGATCGCGCTGGCCCGCAACCAGATCGCGGCCTTGCTGGGCAAGGGCCCCGATCGCGGCCTGGATGTGACGCTGCCGGCCAGCCCCAAATTGAAGGCGTTCGGCGTGCCGTCCAACCTGGCCGCCAATTTGATCGGGCGCCGTCCCGATGTGGTCGCCGCGCGCCTGCGCGCCGCCGCCGCGGCCAAAAGGATCGATGCCGCGCATGCCGACTTCTATCCCAACGTCAATCTTTCCGGCTATCTGGGCTATCAATCGTTCGGGATCAAAGACCTGATCAGTCCCGCCTCCCTGATCGGCCAGATCGGGCCGGCGATCTCGCTGCCGATTTTCGATGGCGGGCGGATCGAAGGCGCCTATCGCGGCGCGCGCGCCCAATATGACGAAGCGGTCGCGACCTACGACCAGACCTTGACCACGGCGTTGCGCGAAGTCGCCGACGCCCTGGCCAACCAGCGCGAACTGACCAAGGAACTGGAACATTCGCGCGCCGCGCTCGCCGCCAGCGAAGACGCGTATCGCGTGGCACAGCAACGCTATGGCGCGGGGCTTTCGCGCTACCTCGATGTCCTGACGTCAGAAGACACGCTGGTGACCCAGCGCCGCGCCGTCGCCGATCTTCAGGCGCGCGCGTTCGTGCAGGATGTGACTTTGATCCGCGCCTTGGGCGGGGGATTTCAATATGACGCGCAACAACGCGTTGCGCGGACGGGAGACTAG
PROTEIN sequence
Length: 492
MTVRYSFMITRKSAKLLTGVALLGLAACAPDLGPLPVAKTPDAYAVQKTFDAAAADWPAESWWTAYGDAQLDTLIAEGLADAPDLKRAEARLRQADALAQQAGASRYPNITANSSFTETRNSLNQGFPAAFQSFLPHGYHDNGRITGDASYNPDFFGKNRATFAAATSEADAARVDLAAAKLTLSSAIANAYANLVQLAADREAAVDALNVRKQSADLLSQRFSQQLENTSTVSEAKSRSFAAEAELDRIDGQIALARNQIAALLGKGPDRGLDVTLPASPKLKAFGVPSNLAANLIGRRPDVVAARLRAAAAAKRIDAAHADFYPNVNLSGYLGYQSFGIKDLISPASLIGQIGPAISLPIFDGGRIEGAYRGARAQYDEAVATYDQTLTTALREVADALANQRELTKELEHSRAALAASEDAYRVAQQRYGAGLSRYLDVLTSEDTLVTQRRAVADLQARAFVQDVTLIRALGGGFQYDAQQRVARTGD*