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SCN18_30_10_14_R2_B_scaffold_1352_19

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 19825..20379

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 176.0
  • Bit_score: 168
  • Evalue 7.00e-39
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003687A32 similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 182.0
  • Bit_score: 164
  • Evalue 5.50e-38
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 183.0
  • Bit_score: 161
  • Evalue 2.20e-37

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGAGATTGTTCGTTGCTCTGCCGATCCCGCGACCCGTCGCGCAAAGCATCATGCTGATCCAAGGCGGTGTGCCGGGCGCGCGCTGGCAGACGGCCGAGCAGCTGCACATCACCTTGCGCTTCATCGGCGAGGTGGATGGACGTGAGGCCGCCATGCTGGACGATGCGCTGGCGAGGATCGTGGCGCCGGCCTTCGATCTTCAACTGCATGGCGTGGGCCAGTTCGGCAACAAGCAGCCGCACGCCCTGTGGGCGGCAATCCGCAAGTCCGAAGCGCTGGAACATCTGCAGCGCAAGGTGGACAATGCCATCCGCCGGGTCGGCCAGCCCCAGGATGCGTATAAATTCACCCCGCATGTGACGGTGGCGCGCCTGCGCAATCCCGAAAGCAGAAAAATGATCGAATGGCTGGCGGATCGTGCGCTTTTCACCGGCCCCGAATTCCGCGTCGATGCGTTCCATCTCTATTCCAGCCGTCTCACCAGCGACGGCAGCGTCTATGCGGTGGAGCGCGAATATCTTTTGGAGAGTTCCGATGGCGAAATTGCCGATTGA
PROTEIN sequence
Length: 185
MRLFVALPIPRPVAQSIMLIQGGVPGARWQTAEQLHITLRFIGEVDGREAAMLDDALARIVAPAFDLQLHGVGQFGNKQPHALWAAIRKSEALEHLQRKVDNAIRRVGQPQDAYKFTPHVTVARLRNPESRKMIEWLADRALFTGPEFRVDAFHLYSSRLTSDGSVYAVEREYLLESSDGEIAD*