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SCN18_30_10_14_R2_B_scaffold_1868_24

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(13093..13929)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L2 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RL2_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 278.0
  • Bit_score: 435
  • Evalue 2.50e-119
rplB; 50S ribosomal protein L2 similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 278.0
  • Bit_score: 435
  • Evalue 7.10e-120
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 278.0
  • Bit_score: 435
  • Evalue 3.50e-119

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Taxonomy

SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 → SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 → SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGGCTTTGAAGCAATACAAACCCTCGACTCCCGGCCAGCGTCAGCTGGTGCTGGTGGACAAGTCCGGTCTGCACAAGGGCGGTCCGGTCAAGTCGCTGACCGAAGGCAAGCACTCCAAGGGCGGCCGCAACAATACCGGCCGCATCGTGGTGCGCTGGCAGGGCGGCGGTCACAAGCAGCGCTATCGCGTCATCGACTTCAAGCGCCGCAAGTTCGACCAGCCGGCGGTTGTCGAGCGCTTGGAATATGATCCCAACCGCACCAGCTTCATCGCGCTGATCAAGTACAAGGACGGCGAGTTGGCCTACATCCTGGCGCCGCAGCGGTTGGCCGTGGGCGACACCGTCGTGTCGGGCGAGCGGGTTGACGTGAAGATCGGCAACGCCATGCCGCTGTCGTCGCTGCCGGTGGGTACCATCGTGCACAATATCGAGATGAAGCCGGGCAAGGGCGGCCAGGTGGCGCGTTCCGCCGGCACCTATGCTCAGTATCTGGGTCGCGACGCCGGTTATGCGCTGATGCGCCTGAATTCGTCGGAAGTGCGCAAGATCCCGCTCACCTGCATGGCGACGGTCGGCGCGGTGTCCAATCCCGACCATATGAACGAAGTGATCGGCAAGGCCGGCCGCAATGTCTGGAAGGGCAAGCGTCCTTCGGTCCGCGGTACCGCCATGAACCCGATCGACCATCCCCATGGCGGCGGCGAAGGCCGCACCAAGGGCGGCCGTCACCCGGTCACGCCCTGGGGCAAACCGACCAAGGGCGCCAAGACGCGCGTCAACAAGCGGACCACGAAGTTCATCGTGCGTACGCGCAAAGGCAAGGCACAAGGGTAA
PROTEIN sequence
Length: 279
MALKQYKPSTPGQRQLVLVDKSGLHKGGPVKSLTEGKHSKGGRNNTGRIVVRWQGGGHKQRYRVIDFKRRKFDQPAVVERLEYDPNRTSFIALIKYKDGELAYILAPQRLAVGDTVVSGERVDVKIGNAMPLSSLPVGTIVHNIEMKPGKGGQVARSAGTYAQYLGRDAGYALMRLNSSEVRKIPLTCMATVGAVSNPDHMNEVIGKAGRNVWKGKRPSVRGTAMNPIDHPHGGGEGRTKGGRHPVTPWGKPTKGAKTRVNKRTTKFIVRTRKGKAQG*