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SCN18_30_10_14_R2_B_scaffold_1665_1

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(3..185)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1231341 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter orientalis 21F-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 62.0
  • Bit_score: 105
  • Evalue 1.40e-20
DNA-directed RNA polymerase subunit omega n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VAP2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 58.0
  • Bit_score: 105
  • Evalue 1.30e-20
rpoK; DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 59.0
  • Bit_score: 104
  • Evalue 8.20e-21

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
ATGGCGCGCGTGACCGTCGAAGACTGCGTCGAGAAGGTGCCGAACCGCTTCGAGCTGGTTCTGCTGGCCGCCCAGCGCGCCCGCAATATCAGCCGCGGTGAGGAAATCCAGCTCGACCGGGACAACGACAAGAATCCCGTCGTCGCGCTCCGCGAGATCGCCGACGAGAAGCTGACGCCGGAG
PROTEIN sequence
Length: 61
MARVTVEDCVEKVPNRFELVLLAAQRARNISRGEEIQLDRDNDKNPVVALREIADEKLTPE