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SCN18_30_10_14_R2_B_scaffold_3343_12

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 10585..11298

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Leptothrix ochracea L12 RepID=I4Z518_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 238.0
  • Bit_score: 228
  • Evalue 4.00e-57
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KHD08485.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 235.0
  • Bit_score: 233
  • Evalue 2.30e-58
O-antigen transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 237.0
  • Bit_score: 216
  • Evalue 7.60e-54

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Taxonomy

Acinetobacter sp. NIPH 809_SCNpilot_P_inoc_Acinetobacter_41_9_partial → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGTTACGTCTTTCAGACTCAATGTCGCCGCCAATTTTGTTGGCCAATTCTATACGACGGCGATTGGGATTTTGTTGGTCCCACTCTATCTTCGCTTCATGGGAACCGAAGCCTATGGTCTGGTAGGTTTCTTCACCATGTTGCAGGGGTGGTTTTATTTACTTGACATCGGGCTGACTCCGACGATCGCTCGCGAGGCCGCGCGCTATCGGGGCGGGAAGTTGGAAGCGGAAGGCTTCCGAACACTGGTTCGGGCACTGGAGGTTTCTTTTTGGACTATCTCCGCGATTGCAGCGTTTGTTCTTGCGTTATCTTCCGGCCTTATCGCCACAAAGTGGCTTCATGTCGAAAAATTGCCGCTGACAGAAGTCAATCGAGCCGTCGTCTTAATTGTAACAACGGCTGGTCTAAGGTTGGTTTCCTCCTTCTATCGCAGCACGCTTAGCGGCTTTGAGAAATTTGTCTGGCTCTCGTCTTTTGGCATCGCTTCATCTACAGCGCGATTTGTTTTTGTGCTGCCGTTTATGATTTTCTTTGGTGCGACACCAACGCGCTTTTTCGGCTACCAATTGGTTGTTGCTCTACTTGAGGTCGCGGTCCTAGCCTTTGAAGCATATAGGTTCATTCCGCGTGTGAAAATTAGCAACCATCTGGCGGTATATGTGAGGGCCCTTCAAGGCGTTGCCAAATTTTCAATGACTATCGCCTTCACA
PROTEIN sequence
Length: 238
MVTSFRLNVAANFVGQFYTTAIGILLVPLYLRFMGTEAYGLVGFFTMLQGWFYLLDIGLTPTIAREAARYRGGKLEAEGFRTLVRALEVSFWTISAIAAFVLALSSGLIATKWLHVEKLPLTEVNRAVVLIVTTAGLRLVSSFYRSTLSGFEKFVWLSSFGIASSTARFVFVLPFMIFFGATPTRFFGYQLVVALLEVAVLAFEAYRFIPRVKISNHLAVYVRALQGVAKFSMTIAFT