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SCN18_26_2_15_R2_B_scaffold_113_42

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: 43764..44321

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQF7_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 161.0
  • Bit_score: 152
  • Evalue 3.70e-34
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 161.0
  • Bit_score: 152
  • Evalue 1.00e-34
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ABS62140.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 161.0
  • Bit_score: 152
  • Evalue 5.20e-34

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCGTCTCATGCTCAGCTCATGCCGCAGACCCCGGGTGTCCTTGGCGGCGTTTCCTTCACGGATCTCTCCACGCTTCTGGTGCAGGCCCAGCGCAGCCTGCATGCCGATCCGGACGCGGCCGAGGCCATGCTGGGCCGTGCGGCGGCGATGCTGCTGGGTGCGGCACCCGAGAGGCGGCCGGCCAGCCCGACCGGGGCGCTGGCCGACTGGCAGGTGAAGCGGGTGAAGGCGCATGTCGAGGCAAGGCTCGACAGCTCCATCCGGCTCGCGGATCTCGCGGCGCTGGTGCGCCTGACCCCGAGCCATTTCGGCCGCGCGTTCAAGGCGAGCGTCGGGGTGACCCCGCACGCCTACATCCTGGAACGGCGGATCGAGCGTGCCCGCATGCTGATGCTGACCACGACGACGCCGCTCGCGCAGATCGCCCAGGACTGCGGGATGGCCGACCAGTCTCATCTGACCCGCGTGTTTCGGCGCTTCGTCGGCAGCAGCCCGTATGCCTGGCGCCGGCGGCAGCAGGCGGAGGGTTCCTCCGCGGTGATCACCCGCCACTAG
PROTEIN sequence
Length: 186
MASHAQLMPQTPGVLGGVSFTDLSTLLVQAQRSLHADPDAAEAMLGRAAAMLLGAAPERRPASPTGALADWQVKRVKAHVEARLDSSIRLADLAALVRLTPSHFGRAFKASVGVTPHAYILERRIERARMLMLTTTTPLAQIAQDCGMADQSHLTRVFRRFVGSSPYAWRRRQQAEGSSAVITRH*