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SCN18_26_2_15_R2_B_scaffold_488_4

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: comp(5010..6488)

Top 3 Functional Annotations

Value Algorithm Source
Nickel-dependent hydrogenase, large subunit n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4U6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 494.0
  • Bit_score: 598
  • Evalue 4.00e-168
Nickel-dependent hydrogenase, large subunit {ECO:0000313|EMBL:EGX99449.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 494.0
  • Bit_score: 598
  • Evalue 5.60e-168
nickel-dependent hydrogenase large subunit similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 498.0
  • Bit_score: 572
  • Evalue 6.60e-161

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Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1479
ATGACACGGCTCGTCCTCGGGCCGTTCAACCGGGTGGAAGGCGACCTCGAGGTGCGGCTCGACGTCGCATCGGGCGAGGTGCGCGCGGCGCATGTCGTCGCGCCGCTCTATCGCGGGTTCGAGGCGATGCTGGTCGGCCGTTCGGCCGCCGACGCGCTGGTCTACGCCCCCCGCATCTGCGGCATCTGCTCGGTTTCCCAGTCCGTGGCCGCCGCCGCGGCCCTGGCCGAAGCGACCGGCGCCGGCGCGCCGCCCAACGGCCGCCACGCGATCAACCTGGTCCATGCGGTGGAGAACGTCGCCGACCACCTGACCCATTTCTACCTGTTCTTCATGCCCGATTTTGCCCGGCCCGCTTACGCGACGGCGCCCTGGTATCCGGCCGCCGCCGCCCGCTTCGCGGCGATCCACGGCGAGGCGAGCGCCGCATTCCTGCCGGCCCGTGCGCAATGGATGCAGATGATGGGGGTGCTCGCGGGCAAGTGGCCGCACACGCTCTCGATCCAGCCCGGCGGCACGACGCGCGGCCTCGATCGCGGCGCCCTGGCGCGCCTGGCCGGACTGCTCGCCGGCTTCCGCCGCTTCGTCGAGCGAACGGTGTTCGGCGACCGGTTGGAAAACATCGCGCACCTGGCCTCGTCCGACGCGCTGGCGGCCTGGGCGGAGGCGCATGCCGGCAGCGATTTCGGCCGCTTTCTCGCCATCGCGCGCAGCACGCGGCTCGACCGGCTGGGGCCGTCGATCGGGCGATGGATGAGCTTCGGCGGCTACCCGACCGCGGACGGCCACGCCTTCGCCCGCGGCCTGGTCGAGGAGGGATGGCGCCGCCCGCTCCCGGTCGAGGCCATCGCCGAGGATGTCAGCCATGCCTGGTACGGCCTGCAGGATGGCGGGCCGCCGACCACCGGCCGCACGCACCCGCAACTCGACAACGCCGACGCCTATAGCTGGTGCAAGGCGCCGCGGCTCGATGGCCGCCCGGTGGAGGTCGGCGCCCTCGCGCGGCAACTGGTCGACGGGCAGACGCTGATCGTCGACCTCGTGGCGCGATACGGCGGCAATGCCGCGACACGGGTGATCGCCCGCCTCGTCGAAACGGCGCGCATCCTGCTGCTGATGGAAACCTGGCTCGCCGAGATCCGGCCCGACGAGACCTTCATTCGCCACGGCGTCGATCCTCGCGCGGCCGGCACCGCGTCCCGGATCGGTGACGCAAGTGGGTCGTCCGGGGCGGGGCTCAGCGAGGCGGCGCGCGGTTCCCTCGGCCACTGGCTGCGCCTGCGCGACGGGCGGATCGCCCACTACCAGATCATTGCCCCGACCACCTGGAACTTCTCGCCCCGCGACGCGACCGGAACCCCCGGGCCGCTCGAGCAGGCGCTGTGCGGAACCCCGGTGCGGCCGGGAGAGACCGACCCCGTTTCGGTCCAGCACGTGGTGCGCTCGTTCGACCCCTGCATGGTCTGCACCGTGCATTGA
PROTEIN sequence
Length: 493
MTRLVLGPFNRVEGDLEVRLDVASGEVRAAHVVAPLYRGFEAMLVGRSAADALVYAPRICGICSVSQSVAAAAALAEATGAGAPPNGRHAINLVHAVENVADHLTHFYLFFMPDFARPAYATAPWYPAAAARFAAIHGEASAAFLPARAQWMQMMGVLAGKWPHTLSIQPGGTTRGLDRGALARLAGLLAGFRRFVERTVFGDRLENIAHLASSDALAAWAEAHAGSDFGRFLAIARSTRLDRLGPSIGRWMSFGGYPTADGHAFARGLVEEGWRRPLPVEAIAEDVSHAWYGLQDGGPPTTGRTHPQLDNADAYSWCKAPRLDGRPVEVGALARQLVDGQTLIVDLVARYGGNAATRVIARLVETARILLLMETWLAEIRPDETFIRHGVDPRAAGTASRIGDASGSSGAGLSEAARGSLGHWLRLRDGRIAHYQIIAPTTWNFSPRDATGTPGPLEQALCGTPVRPGETDPVSVQHVVRSFDPCMVCTVH*