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SCN18_26_2_15_R2_B_scaffold_488_18

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: comp(16662..17111)

Top 3 Functional Annotations

Value Algorithm Source
Hydrogenase expression/formation protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z424_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 141.0
  • Bit_score: 156
  • Evalue 1.20e-35
HupG protein {ECO:0000313|EMBL:EGD60636.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 141.0
  • Bit_score: 156
  • Evalue 1.70e-35
hydrogenase-1 expression HyaE similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 139.0
  • Bit_score: 135
  • Evalue 1.10e-29

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Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
GTGACATACGACCTCAGCACGTTCTCGCCGCTCGCGCGCCGGATCATCGAGACGGAAGGTTTCCCCGTGGTGGGCGCGGACGCGCTGGACCCGGTATGCGCCGCACTGCCCTTCGCCATGCTGTTCCTCGCCGGGGATGCCAGCCGCCTCAGTGAGAGTGACGACGCGGCGGTGATCCTGGTCGAACTCCACAAGCTGCTCGGCGACCGCGTGACGCCGCTGGTGGCCGCCCGCGAGGACGAGCGCGCGTTTCACCGGCGCTTCCGATTCACCGCCTTCCCCGCCCTCGTGTTCCTGCGCGACGGCCAGTACCTGGGCTGCATCGAACGCGTGCTCGACTGGCAGGATTACCTGCTGGAGCTACCCGCCATCCTCGGCCGCGCCCCGCACGAACCGCCGCCCTTCCGGCTTCCCGCGCACTGCGCGCCATCGCCCGTGCCGCCGGCATGA
PROTEIN sequence
Length: 150
VTYDLSTFSPLARRIIETEGFPVVGADALDPVCAALPFAMLFLAGDASRLSESDDAAVILVELHKLLGDRVTPLVAAREDERAFHRRFRFTAFPALVFLRDGQYLGCIERVLDWQDYLLELPAILGRAPHEPPPFRLPAHCAPSPVPPA*