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SCN18_26_2_15_R2_B_scaffold_488_20

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: comp(17425..18156)

Top 3 Functional Annotations

Value Algorithm Source
Hydrogenase expression/formation protein hupD n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4W1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 231.0
  • Bit_score: 323
  • Evalue 9.30e-86
Hydrogenase expression/formation protein hupD {ECO:0000313|EMBL:EGX99464.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 231.0
  • Bit_score: 323
  • Evalue 1.30e-85
hydrogenase expression/formation protein similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 216.0
  • Bit_score: 268
  • Evalue 1.70e-69

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Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGCGAGTTGCTCTCCACGTTGGAATCGAAGCGTCCAGTCAGGTCGCGCGGGGGGATGGGGTGACCAGCGAACCGAACGTGCTGATCCTGGGTATCGGCAATCTGCTCTGGGCCGATGAGGGATTCGGGGTGCGCGCGGTGGAGGCGATGCACCGCCTGTACCGGCTGCCCGACTGCGTCCGGCTGGTCGATGGCGGCACCCAAGGCATCTATCTCGTCCAGCTCGTTCGCGACGCGGACGTGCTGATCGTGTTCGATGCCGTCGATTACGGCTTGCCACCCGGCACGCTCAAGCGTGTCGAGGGGGACGAGGTCCCGCAGTTCCTCGGCGTGCGCAAGGTCTCCCTGCATCAGACGGGCTTCCAGGAAGTGCTCGCGATGGCCGAGATGCTGGGCGACCGGCCGCGGCACCTGCTGCTGATCGGCGTGCAGCCCGTCGAGCTCGAGGATTACGGCGGCAGCCTGCGCCCGGAGGTGAAGGCGCAGATCGCGCCGGCCCTGCACCTCGCGCTCGCATATCTTGCCGGGTTCGGCGTGCACGCCGAACCGCGCCAGGGTCCCGTCGCGCCGATCGGCTCGCCCGAGACCGCGATGGACCGCTACGAGGCGCAACGGCCGGCCGCGCAGGACGCGTTCCGCGCCGGCGACGACCGGGTGCTCGGCGGCGGAGGCTGGCGCGGTCCGACGGATTTCGACGCCGAGATGGCCCAGCTCGTGGCGCGGTCGCATTGA
PROTEIN sequence
Length: 244
MRVALHVGIEASSQVARGDGVTSEPNVLILGIGNLLWADEGFGVRAVEAMHRLYRLPDCVRLVDGGTQGIYLVQLVRDADVLIVFDAVDYGLPPGTLKRVEGDEVPQFLGVRKVSLHQTGFQEVLAMAEMLGDRPRHLLLIGVQPVELEDYGGSLRPEVKAQIAPALHLALAYLAGFGVHAEPRQGPVAPIGSPETAMDRYEAQRPAAQDAFRAGDDRVLGGGGWRGPTDFDAEMAQLVARSH*