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SCN18_26_2_15_R2_B_scaffold_371_28

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: 29848..30249

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RNY3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 110.0
  • Bit_score: 158
  • Evalue 3.70e-36
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFH10984.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 110.0
  • Bit_score: 158
  • Evalue 5.20e-36
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 127.0
  • Bit_score: 149
  • Evalue 3.70e-34

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGACCCCGTTCGGTGCGCGATTGCGGGCGCTGCGTGCGGCCCGCGGGATCACGTTGAAGCAGCTCGCGGCGGAGCTGCAGGTGTCGTCCGCCTATCTCTCGGCCCTCGAGCACGGCAAGCGCGGCACGCCCAGCGCCGGGCTCGTGCACCAGGTGAACGAGTTCTTCGGGTTGATCTGGGACGATGCGGAGGATCTGAACCGGCTCGCGCGCCTGTCCAATCCGCGCGTGGTGGTGGACACCGGGGGTCTCACGCCGGAACAGACCGCGCTCGCGAACCGGCTGGCGCAGGTGATTCATCGGCTGCCGCCCGAGACGGTGGCGTCCCTGCATGCCACCCTCGACAGCAGCGGGGCCGGCCCGAAGCCGCGCTTGCGGCGGTTGGCGCGCAAGGGGCCGTAG
PROTEIN sequence
Length: 134
MTPFGARLRALRAARGITLKQLAAELQVSSAYLSALEHGKRGTPSAGLVHQVNEFFGLIWDDAEDLNRLARLSNPRVVVDTGGLTPEQTALANRLAQVIHRLPPETVASLHATLDSSGAGPKPRLRRLARKGP*