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SCN18_26_2_15_R2_B_scaffold_601_16

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: 14761..15168

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 136.0
  • Bit_score: 220
  • Evalue 8.70e-55
DNA-directed RNA polymerase subunit omega n=3 Tax=Acidiphilium RepID=RPOZ_ACICJ similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 136.0
  • Bit_score: 215
  • Evalue 2.60e-53
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 136.0
  • Bit_score: 215
  • Evalue 7.30e-54

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGGCGCGCGTCACCGTTGAAGACTGCGTCCAGAAGGTCCCGAACCGGTTCGAGCTGGTTTTGCTCGCCGCCCAGCGCGCGCGCAACCTGAGCCGTGGCGAGGAACTGACCGTCGATCGCGACAACGACAAGAACCCGGTCGTCGCGCTGCGCGAGATCGCCGACGAGACGATCGAGCTCGGCCGCATCGAGCAGGACCTGATCAAGTCGCTCTCCCGCGCCCCCGAACCGGAGCCGGCCGACGAGGAAGTGCTCGACCTCATCCCGACCGACCAGAACATCTTCGGCCTGCAGGACGTCACCGCCGAGGAAGAGGCGGCCGGCCTCCCCGTCGAGAACGAGGACCTGTCCCCAGAGGACATGGAAGCCGCGATCGAGGCGGAACTCGGCGGCCGTCCCCGGCGCTAG
PROTEIN sequence
Length: 136
MARVTVEDCVQKVPNRFELVLLAAQRARNLSRGEELTVDRDNDKNPVVALREIADETIELGRIEQDLIKSLSRAPEPEPADEEVLDLIPTDQNIFGLQDVTAEEEAAGLPVENEDLSPEDMEAAIEAELGGRPRR*