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SCN18_26_2_15_R2_B_scaffold_762_6

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: 5158..5646

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BU49_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 163.0
  • Bit_score: 192
  • Evalue 2.20e-46
DNA-directed RNA polymerase sigma-E/Sigma-24/FecI {ECO:0000313|EMBL:GAN78000.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 158.0
  • Bit_score: 193
  • Evalue 1.80e-46
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 163.0
  • Bit_score: 192
  • Evalue 6.10e-47

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGTCGCAGGAATTTCAAGAGCAGTTGATCTCTTTTCTGCCCAAGATGCGGGTGTGGGCACTGGCGCTGACGCGCAATCGCGCGGCTGCCGAAGATCTCACCCAGGATGTGGCGACGAAGGCCCTGGTGGCGCGCGATTGCTTCGTGCCCGGCACGAACTTCTCCGCCTGGGTGCATCGTATCATGATCAACCACTTCATCAGCAGCGTGCGCAATCGGCGCGAGTTCACCGACATGGACTCGATGCCCGATCTGCCGGTGCCGGCGGCGCATGAGGATCGCACCGCGCTGCGTGAACTCGGCTGGGCGCTCAATCGCCTTCCGGCGGATCAGCGTGAGGCACTGTTCATGATCGTGCTGCAGGAGAAATCGTACGAGGACGCCGCGGAAGCGACGGGTTGCGCGATCGGCACCTTGAAGAGCCGCGTGCATCGCGCGCGCCTGCAACTCCGCACCTATCTGACGGGCGAGCAGAAGAAAGCCGCCTGA
PROTEIN sequence
Length: 163
MSQEFQEQLISFLPKMRVWALALTRNRAAAEDLTQDVATKALVARDCFVPGTNFSAWVHRIMINHFISSVRNRREFTDMDSMPDLPVPAAHEDRTALRELGWALNRLPADQREALFMIVLQEKSYEDAAEATGCAIGTLKSRVHRARLQLRTYLTGEQKKAA*