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SCN18_26_2_15_R2_B_scaffold_946_6

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: comp(5298..6053)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6AN36_PSEVI similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 245.0
  • Bit_score: 214
  • Evalue 6.30e-53
Strain LMCA8 contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36649.1}; TaxID=33069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas viridiflava.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 231.0
  • Bit_score: 213
  • Evalue 2.00e-52
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 248.0
  • Bit_score: 203
  • Evalue 7.00e-50

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGGATCGGCAGGACACCCAAACGCCTGCCGATCCCGTGCCCGCCTATATGCGCGTCCAACAGGACGTGCTCCGCCGTATCCGCGACGGCGCGCTCGTGCCCGGCGACCGCATTCCCGCCGAACGCCTGCTGTCGGAGCAACTGGGCGTCAGCCGGATGACGGTGCGGCAGGGGCTGGAGGCGCTGGTCCGCAGCGGCGTGCTGGTGCGCGCCGGCACCAGCGGCACAAGGGTCGCCGAAGCCCGCGTGCCACGACTGATCGACACCAGCCGGAGTCTCAGCCTGAGCGAGGTCGTCGCCCGTTCCGGTGCGCGGCCGGGCAGCCGGCTGCTCTCCTTCGCCAGCGTCCGCGCGACCGCCGATCAGGCGACACGGCTGGGGCTTGCCACCGGTGCGGCGCTCGTCACGCTCCGCCGCCTGCGCACCGCCAACGACGCGCCGTTCTGTGTCGAAACCAGCGTGCTGCCGGCGGCGCGCGTGCCCGGCCTCACCGCCTCGGATCTGGTGGAGAACGCCTCGCTCTACGCGCTGCTCGCCGACCGGTTCGGCATCCGCACCCGCACGCGCCGCGGCGAGATCGAGGCGGCACCGATCGATCGGGAGGACGCCGCGCTGCTGGGCCTCCCGCCCGGAACCAACGTGCTGCTCTACCGCAGCGTGATCTTCGACGATCAGGGCCAACCGGTCGAATACATGATCTCGGTCAACCACCCACGGCGTGTGGTCTTCACCACGCAGCAGGAAGTCGCCCCATGA
PROTEIN sequence
Length: 252
MDRQDTQTPADPVPAYMRVQQDVLRRIRDGALVPGDRIPAERLLSEQLGVSRMTVRQGLEALVRSGVLVRAGTSGTRVAEARVPRLIDTSRSLSLSEVVARSGARPGSRLLSFASVRATADQATRLGLATGAALVTLRRLRTANDAPFCVETSVLPAARVPGLTASDLVENASLYALLADRFGIRTRTRRGEIEAAPIDREDAALLGLPPGTNVLLYRSVIFDDQGQPVEYMISVNHPRRVVFTTQQEVAP*