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SCN18_26_2_15_R2_B_scaffold_624_6

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: comp(4425..5603)

Top 3 Functional Annotations

Value Algorithm Source
Serine phosphatase RsbU, regulator of sigma subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIW0_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 362.0
  • Bit_score: 201
  • Evalue 8.60e-49
Response regulator {ECO:0000313|EMBL:KFN39724.1}; TaxID=1538640 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 283.0
  • Bit_score: 212
  • Evalue 8.90e-52
serine phosphatase RsbU, regulator of sigma subunit similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 362.0
  • Bit_score: 201
  • Evalue 2.40e-49

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
GTGGACAGCGTCGGCGACCAGACCATCAACCTCCCCATCGGGGCGCTGGCCAGGCCGGCCGCGCCCAAGGTGGTCGATGCGCTGGTCGTGCTTGGACGCGACGGGTCGTTCGGCACCGCGTCGCGGGAGGTCTCGCTTTCGGACGGGCTTCTGCGGGACGGCGTGCTGCAGCCGCTGCCGCCAGGCGGCCGCGCCCCGCTCGACCGGCTGCCGCTGACGATCGGACGGGCGGCGCCCGCCGACCTGATGCTGAGCGACGTCACCGTCTCCCGCCGGCACTGCCGGCTGAGCCGCGCGGGAGATCGGGTACGGCTGGACGACCTCGGCTCGACCAACGGCACCTTCGTGAACGGCACCCCAGTCGACCCAGGCGGCGTGGAGCTGCAGGACGGGGCGCTGATCCAGGTGGCGGCGCGGACGCTGCGCTATGAGCGCCGGTCCCACGCCGCGGCCGCAGCCGACGCGGCACTGGATCAGGACCTGCGGGACGCCAGCGACTACGTGGCCGCGATCCTGCCGCCGCCGCTCTCGAGCGGCGCCGTCCAGGCGGAGTGGTTTTTCCGCCCGAGTTCACGGCTGTCAGGCGACGCGTTCGGCTATCGCTGGCTGGACGCGGATCGGTTCGCCTTCTTCCTGATCGATGTCGCGGGCCATGGCACCGCGGCGGCCCTGCATGCGGTGTCGATCGCCAACGCCCTGCGCCAGCAGATGCTGCCGAACGTCGACTTCGGCGCCCCCGATGCGGTGTTGCGGGCGCTGAACCGGTCGTTCCCGATGGAGCGGCACGACGACCGCTTCGCCACGATCTGGTACGGCGTCTACGACCATCCGACCCGGCGGCTCGCCTATGCCAGCGGTGGCCACCATCCGGCGTACCTGCTCGCGCCGGGGGCGGACCCGGTACCTCTCGCCACCCGCAACCCGGCGATCGGCATGGTGCCCGACCGCGCCATGCAGGCGGGCGCCTGCACCGTGCCGCGCGACGGAATGCTGCACCTGTTCAGCGATGGCGCCTTCGACCTCGGCGGCCCCGAAGGCGAGACGCTCGATCTCGCGGGCCTGGTGAGCCTGCTGCCCGACAGCGCGACTCCGCGCGGCCTGTATGAGGCGATCCTGCGCCGGGTCGGCCCCGCAGCGATCGAGGACGACCTCTCCGTGCTGTCGTTCCGCTTCGCATGA
PROTEIN sequence
Length: 393
VDSVGDQTINLPIGALARPAAPKVVDALVVLGRDGSFGTASREVSLSDGLLRDGVLQPLPPGGRAPLDRLPLTIGRAAPADLMLSDVTVSRRHCRLSRAGDRVRLDDLGSTNGTFVNGTPVDPGGVELQDGALIQVAARTLRYERRSHAAAAADAALDQDLRDASDYVAAILPPPLSSGAVQAEWFFRPSSRLSGDAFGYRWLDADRFAFFLIDVAGHGTAAALHAVSIANALRQQMLPNVDFGAPDAVLRALNRSFPMERHDDRFATIWYGVYDHPTRRLAYASGGHHPAYLLAPGADPVPLATRNPAIGMVPDRAMQAGACTVPRDGMLHLFSDGAFDLGGPEGETLDLAGLVSLLPDSATPRGLYEAILRRVGPAAIEDDLSVLSFRFA*