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SCN18_26_2_15_R2_B_scaffold_434_5

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: comp(3208..4161)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHM6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 297.0
  • Bit_score: 387
  • Evalue 1.20e-104
LysR substrate binding domain protein {ECO:0000313|EMBL:EFH13199.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 297.0
  • Bit_score: 387
  • Evalue 1.60e-104
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 296.0
  • Bit_score: 339
  • Evalue 7.90e-91

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGCTTTTTGACGTTTTGATCGATTTCATCGATCATGCGCCCATGATCCTCCCCAGCCCACAGCAGCTCCGCTACCTCGTCGCCCTCGCCGAATGCCGCCATTTCGGCCGCGCCGCGCTGGCCTGCGCCGTCACCCAGTCCACCCTATCGGCCGGCCTGCTCGCGCTCGAGCGGCAGCTCGATGCCGCGATCCTCGACCGCGCCGCCGGCCGCCACGTGGTGTTCACCCCACTCGGCCTCGAACTGGTCGAGCGCGGCCGCACCGCGCTGGCGGCGCTGGAAGCGGTGACCGAGGCCGCCACCGCCGCGCGCGAACCCATGAGCGGTCCGTTGCGCATGGGCGTCATCCCCACCATCGGCCCGTTCCTGCTGCCCAAACTGATGCCCGCCTTGCGATCGGCGTTCCCGCGCCTGCGCCTGTTCCTGCGGGAAGACACGACCGCGAACCTGGTGAACCGGCTGGAGGCCAACCGCATCGACGTGCTGCTGGTGGCGCTCCCCGGCGATTGCGGCGGCGCCGACGCGCTGCCGGTGGTGCAGGACGAGTTCCTGGTCGCGCTCCCGCCCGGACACCGGCTCGCCGGCGAGCCGCAAATCCCCCCGGCCGCACTCGGCTCCGAACGCCTGCTGCTGCTGGAAGACGGGCATTGCCTGCGCGACCAGGCCCTGGCGGTCTGCGGCCTGCTCGCCGGCAGCCGGGACGACCAGGACGGGTTCGCCGCGACCTCGCTCCATACTCTTGTACAGATGGTCGCCGGCGGCCTGGGGGTGACCCTGCTGCCCAGGCTCGCGGTCGACGCGGGAATCACCCAGGGCACGCCGCTCATCCTCCGCCCGCTGGCCGCCGCCGGGGCCTGGCGCACCATCGGCCTCGCCTGGCGGCCGAACGCGCCCCGTGCCGCCGACTACCGCGCCCTCGGCCCGCATCTCGCCGACGCCTGCAAGCTCGACTGA
PROTEIN sequence
Length: 318
MLFDVLIDFIDHAPMILPSPQQLRYLVALAECRHFGRAALACAVTQSTLSAGLLALERQLDAAILDRAAGRHVVFTPLGLELVERGRTALAALEAVTEAATAAREPMSGPLRMGVIPTIGPFLLPKLMPALRSAFPRLRLFLREDTTANLVNRLEANRIDVLLVALPGDCGGADALPVVQDEFLVALPPGHRLAGEPQIPPAALGSERLLLLEDGHCLRDQALAVCGLLAGSRDDQDGFAATSLHTLVQMVAGGLGVTLLPRLAVDAGITQGTPLILRPLAAAGAWRTIGLAWRPNAPRAADYRALGPHLADACKLD*