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SCN18_26_2_15_R2_B_scaffold_441_11

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: 11310..11636

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S30 n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000364C6B7 similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 104.0
  • Bit_score: 127
  • Evalue 5.70e-27
Cold-shock protein DNA-binding similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 104.0
  • Bit_score: 124
  • Evalue 1.40e-26
Cold-shock protein DNA-binding {ECO:0000313|EMBL:ACL71346.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 104.0
  • Bit_score: 124
  • Evalue 6.80e-26

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGGCCGCAGACGTCCGGATTTCGTTCCGTGGCATGGAGTCTTCGCCGGCCGTCGAGGCGCAGGTACAGCGCCGGCTGGCAGAGTTGGAGCAGGTCTCGGATCGGATCTCGGCGTGTCGGGTGACGCTGGAAATGGGCCATCGCCATCATCGGCACGGCAACATCTACCACGTGCACGTCGATCTCTCGATCCCCGGCAGGCAGATCATCGTGAACCGCGAGTCGGGCCACGACCACGCGCATGAAGACATCTATGTCGCGCTGCGCGACGCCTTCGATGCCGCGCGCCGCCAACTTCAGGAGCACATGGCGCGCGTGAGCGGATAG
PROTEIN sequence
Length: 109
MAADVRISFRGMESSPAVEAQVQRRLAELEQVSDRISACRVTLEMGHRHHRHGNIYHVHVDLSIPGRQIIVNRESGHDHAHEDIYVALRDAFDAARRQLQEHMARVSG*