ggKbase home page

SCN18_26_2_15_R2_B_scaffold_709_22

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: 24934..25551

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family with Cupin sensor domain n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13H28_BURXL similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 185.0
  • Bit_score: 174
  • Evalue 1.00e-40
Putative transcriptional regulator {ECO:0000313|EMBL:KFC64706.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 183.0
  • Bit_score: 211
  • Evalue 1.00e-51
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 185.0
  • Bit_score: 174
  • Evalue 2.80e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGAACGACAGCGAACCGACCCAAAACCAGGCCGATTCCATCCCACCCAACAACACCCAGGGCCCGGTCGGCGAACGCCTGCGGCGCCTGCGCAAGGAGCGCGACCTCACGATCCTCGAACTCGCCACCCGCGCAGGCGTCTCCGCCGGCATGATCAGCCAGATCGAGCGCGGCGCCGCCAACCCCTCCATCAAGATCATCCAGCGCCTGAAGACCGCGCTCGGCGTCAATCTGTGGGAAGTGCTCGACAGCGGCGAGCCGCGCACGCCCGAGGATCCGCCCTTCATCCGCCGCCGGCAGGATCGCCCGCGCCTCGTCATGGGCGAGAGCGGCCTCACCAAGGAACTGCTCTCCCCGCAACCCGACCAGAACCTTCGCTTCATGATCGTGCGCATGCCGCCCGGCAGCGAGACGCAGGACGTGCTGATCGGTCGCGGCCACAAGGGCGGCTATGTCCTCGCCGGCCGCGTCGCGCTGCGCGTCGGCGATCGCACCGCCGAGGTCGTGGCCGGCGACAGCTTCCAGTTCCGCAGCGACTTGCCGCACCAGGTCTTCAATCGTTCCGACGAGGAAGCGACGCTGATCTGGATCATGAGCGTGCTCGACACCCATCTCTGA
PROTEIN sequence
Length: 206
MNDSEPTQNQADSIPPNNTQGPVGERLRRLRKERDLTILELATRAGVSAGMISQIERGAANPSIKIIQRLKTALGVNLWEVLDSGEPRTPEDPPFIRRRQDRPRLVMGESGLTKELLSPQPDQNLRFMIVRMPPGSETQDVLIGRGHKGGYVLAGRVALRVGDRTAEVVAGDSFQFRSDLPHQVFNRSDEEATLIWIMSVLDTHL*