ggKbase home page

SCN18_26_2_15_R2_B_scaffold_828_25

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: 24219..24827

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIM1_TISMK similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 191.0
  • Bit_score: 211
  • Evalue 7.30e-52
Transcriptional regulator TetR {ECO:0000313|EMBL:GAN77574.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 198.0
  • Bit_score: 246
  • Evalue 1.70e-62
yhgD; TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 191.0
  • Bit_score: 211
  • Evalue 2.10e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAGAGAGGAAATCCTGGCTTACAAGCGTGAGCGCATCCTCGAGGAGGCGGTGAAGCTGTTCTACGAACGCGGCTTCACCGGCACCACGCTGGACGACATCGCGGCCGAGTTGGGGGTCACCAAGCCCTTCATTTACACGCATTTCCGCAGCAAGGTGGAACTGCTGGCCGCGCTGTGCCGGCCGACGATCGAGCTGTCGCTGGCCGCGGTGCAGGGCGCCGCGGAGGGCGCCGGCTCGCCGACCGAACGGCTGCATCGGGCGATCGTGGACTTCACCAACGTGATCCTGTCGCGCCAGGCCAACATCGCCATCTATTTCCGAGAAGAAAAAAATCTCACGAAGGAGGCCCTGGACGACATCAACGCTCTCCGCAAGCAATTCGACCGGGTGCTGTCCCAGTTGCTGCAGGAGGGTGTGGCCGCCGGCGAGTTCCTGGTGACCGACGTCGACCTCACCTCGCTGGCGATCGGCGGCATGATCAGTTGGGCCTACACTTGGCACCGGCCCGGCGGCCGGCTCGGCCTGGTCGATCTGTCGGAGCGGATGGCCGAACTGACGCTGCAGATGGTCGGGGCGCATCGCGCGGCGGGCGTGAAGGCGGCTTGA
PROTEIN sequence
Length: 203
MREEILAYKRERILEEAVKLFYERGFTGTTLDDIAAELGVTKPFIYTHFRSKVELLAALCRPTIELSLAAVQGAAEGAGSPTERLHRAIVDFTNVILSRQANIAIYFREEKNLTKEALDDINALRKQFDRVLSQLLQEGVAAGEFLVTDVDLTSLAIGGMISWAYTWHRPGGRLGLVDLSERMAELTLQMVGAHRAAGVKAA*