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SCN18_26_2_15_R2_B_scaffold_2125_4

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: comp(2261..2470)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPU3_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 69.0
  • Bit_score: 120
  • Evalue 5.80e-25
Transcriptional regulator cold shock protein DNA-binding protein {ECO:0000313|EMBL:GAN76583.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 69.0
  • Bit_score: 134
  • Evalue 5.40e-29
Cold shock protein similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 69.0
  • Bit_score: 120
  • Evalue 1.60e-25

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGCCGAAGGGCACGGTGAAGTGGTTCAACCCGACCAAGGGATACGGGTTCATTGCCCCCGATACGGGCGGCAAGGACATTTTCGTTCACATCAGCGCCGTCCAGAAGGCCGGCCTGCGCAGCCTCAATGAAGGCCAGAAGGTCGGCTTCGAGGTCGAGCAGCAGCAGAACGGCCGCACCGCGGCGGTGAATCTGTCACAAGCGGATTAG
PROTEIN sequence
Length: 70
MPKGTVKWFNPTKGYGFIAPDTGGKDIFVHISAVQKAGLRSLNEGQKVGFEVEQQQNGRTAAVNLSQAD*