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SCN18_26_2_15_R2_B_scaffold_5016_6

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: 5858..6397

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transportern ExbD n=1 Tax=Xanthobacteraceae RepID=UPI0003683F02 similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 179.0
  • Bit_score: 192
  • Evalue 3.10e-46
Biopolymer transporter ExbD {ECO:0000313|EMBL:KGJ05862.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 179.0
  • Bit_score: 188
  • Evalue 6.30e-45
exbD, uptake of enterochelin; tonB-dependent uptake of B colicins similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 155.0
  • Bit_score: 186
  • Evalue 6.30e-45

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCCGGCGGAACCGGGTTCGGGCTCGAAGAGGACGGGCCCGAGGAAACCCACGAGATCAACGTCACGCCGTTCATCGACGTGATCCTGGTGCTGCTGATCATCTTCATGGTGGCGGCGCCGCTCGCGACGGTGGACGTGAAGGTGGAGCTGCCGGCGAGCACCGCCGCGCAGCAGCCGCGTCCCGACCATCCGCAGTTCCTGACGCTGCGCGGCGATCTCTCGCTGGTGCTCGGCGACACGCCGGTCACCCCCGAGGAGCTGGGCGCGGCGCTGGACGCCGCCACCGGCGGGGACAAGGACACCCGCGTGTTCCTGCGCGCCGACAAGGGGGTCAGCTATGGCGACCTGATGGGCGCGATGGATGCGCTGCGGGCGGCGGGCTACCTGAAGCTTGCGCTGGTCGGTCTCGAGCGGGCGCCAGCCGCCGGGCCGGTCCCAGCCGCCGGGCCGGTACCGGCCGCCGCGCCGGCCCAAGCGGGCGCCGCGGCGCCGGACGTGCCGGCCGCCGCGACGACGTCTGCCGGCGGCACGCCGTGA
PROTEIN sequence
Length: 180
MAGGTGFGLEEDGPEETHEINVTPFIDVILVLLIIFMVAAPLATVDVKVELPASTAAQQPRPDHPQFLTLRGDLSLVLGDTPVTPEELGAALDAATGGDKDTRVFLRADKGVSYGDLMGAMDALRAAGYLKLALVGLERAPAAGPVPAAGPVPAAAPAQAGAAAPDVPAAATTSAGGTP*